AutismKB 2.0

Annotation Detail for NCAPD3


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:NCAPD3 ( CAP-D3,FLJ42888,KIAA0056,MGC104671,hCAP-D3,hHCP-6,hcp-6 )
Gene Full Name: non-SMC condensin II complex, subunit D3
Band: 11q25
Quick LinksEntrez ID:23310; OMIM: 609276; Uniprot ID:CNDD3_HUMAN; ENSEMBL ID: ENSG00000151503; HGNC ID: 28952
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
507Phosphoserine.
508Phosphoserine.
531Phosphoserine.
972Phosphotyrosine.
1328Phosphoserine.
1329Phosphoserine.
1331Phosphothreonine.
1348Phosphoserine.
1357Phosphoserine.
1384Phosphoserine.
1393Phosphoserine.
Location(AA) Modifications Resource
531Phosphoserine.Swiss-Prot 53.0
531PhosphoserinePhospho.ELM 6.0
1321PhosphoserinePhospho.ELM 6.0
1329PhosphoserinePhospho.ELM 6.0
1331PhosphothreoninePhospho.ELM 6.0
1334PhosphothreoninePhospho.ELM 6.0
1384PhosphoserinePhospho.ELM 6.0
1384Phosphoserine.Swiss-Prot 53.0
1393Phosphoserine.Swiss-Prot 53.0
1393PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
83N-linkedHMM predict
129Phosphoserine(IKK)HMM predict
146Phosphothreonine(PKC)HMM predict
169Phosphoserine(ATM)HMM predict
370Phosphotyrosine(EGFR)HMM predict
370Phosphotyrosine(Syk)HMM predict
432Phosphoserine(CK1)HMM predict
459Phosphothreonine(PKC)HMM predict
490Phosphoserine(CDC2)HMM predict
502Phosphothreonine(CDK)HMM predict
506N-linkedHMM predict
517Phosphoserine(PKB)HMM predict
518N-linkedHMM predict
699Phosphoserine(CDC2)HMM predict
746Phosphoserine(ATM)HMM predict
812Phosphothreonine(MAPK)HMM predict
843N-linkedHMM predict
847N-linkedHMM predict
892Phosphoserine(IKK)HMM predict
894Phosphoserine(CK2)HMM predict
894Phosphoserine(CK1)HMM predict
895Phosphoserine(ATM)HMM predict
898Phosphoserine(IKK)HMM predict
899O-linkedHMM predict
904Phosphoserine(ATM)HMM predict
904O-linkedHMM predict
904Phosphoserine(IKK)HMM predict
913O-linkedHMM predict
998Phosphothreonine(PKA)HMM predict
1066Phosphotyrosine(EGFR)HMM predict
1072Phosphotyrosine(Syk)HMM predict
1114N-linkedHMM predict
1309O-linkedHMM predict
1313O-linkedHMM predict
1317Phosphothreonine(MAPK)HMM predict
1328O-linkedHMM predict
1328O-linkedHMM predict
1329Phosphoserine(MAPK)HMM predict
1329Phosphoserine(CDC2)HMM predict
1331O-linkedHMM predict
1331O-linkedHMM predict
1331Phosphothreonine(MAPK)HMM predict
1384Phosphoserine(CDC2)HMM predict
1390Phosphoserine(ATM)HMM predict
1396Phosphoserine(CK1)HMM predict
1401Phosphoserine(CK2)HMM predict
1414Phosphoserine(PKG)HMM predict
1415Phosphothreonine(CDK)HMM predict
1437Phosphothreonine(CDK)HMM predict
1437Phosphothreonine(MAPK)HMM predict
1437Phosphothreonine(CDC2)HMM predict
1439Phosphoserine(PKB)HMM predict
1439Phosphoserine(CDC2)HMM predict
1449Phosphoserine(ATM)HMM predict
1474Phosphoserine(CDK)HMM predict
1474Phosphoserine(CDC2)HMM predict
1481Phosphothreonine(PKA)HMM predict
1488Phosphoserine(PKA)HMM predict
1492Phosphothreonine(CDK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_015261
  • Location:chr11 133527546-133599635
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
E2F4 G0GSE7516 133598424 133599618 1194 0
ER MCF7GSE19013 133545255 133545693 438 0
FOXA1 DLD1GSE12801 133545149 133546050 901 0
FOXA1 MCF7GSE15244 133540279 133542597 2318 0
Fos K562GSE19551 133598837 133599970 1133 0
H3K4me3 colorectalcancer 133598173 133598497 324 0
H3ac HepG2E 133597484 133598650 1166 0
HIF1 NormHepG2 133599338 133599851 513 0
LIN9 G0GSE7516 133598173 133599896 1723 0
LIN9 SGSE7516 133598245 133599719 1474 0
PHF8 293TGSE20725 133598528 133600325 1797 0
PHF8 HeLaGSE20725 133598661 133600193 1532 0
PHF8 Hs68minusFBSGSE20725 133598866 133600255 1389 0
Rb QuiescentGSE19898 133599004 133599708 704 0
Rb SenescentGSE19898 133598848 133599751 903 0
Rb shRbQuiescentGSE19898 133599013 133599160 147 0
TAF HelaGSE8489 133598173 133598807 634 0
p130 QuiescentGSE19898 133537890 133538072 182 0
p130 QuiescentGSE19898 133598891 133599682 791 0
p130 SenescentGSE19898 133598621 133599749 1128 0
p130 shRbQuiescentGSE19898 133598666 133599668 1002 0
p130 shRbSenescentGSE19898 133598223 133599717 1494 0
p130 G0GSE7516 133598424 133599554 1130 0
p130 SGSE7516 133598460 133599589 1129 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved