AutismKB 2.0

Annotation Detail for VPS8


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Basic Information Top
Gene Symbol:VPS8 ( FLJ32099,KIAA0804 )
Gene Full Name: vacuolar protein sorting 8 homolog (S. cerevisiae)
Band: 3q27.2
Quick LinksEntrez ID:23355; OMIM: NA; Uniprot ID:VPS8_HUMAN; ENSEMBL ID: ENSG00000156931; HGNC ID: 29122
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
26Phosphoserine.
1319Phosphoserine.
1322Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
38Phosphotyrosine(INSR)HMM predict
38Phosphotyrosine(Jak)HMM predict
64Phosphothreonine(MAPK)HMM predict
64Phosphothreonine(CDK)HMM predict
73N-linkedHMM predict
102O-linkedHMM predict
108Phosphoserine(CK1)HMM predict
110Phosphoserine(CK1)HMM predict
120MethyllysineHMM predict
121MethyllysineHMM predict
127Phosphoserine(CK1)HMM predict
262N-linkedHMM predict
289Phosphoserine(CDK)HMM predict
303Phosphoserine(CK1)HMM predict
406N-linkedHMM predict
411N-linkedHMM predict
448N-linkedHMM predict
679Phosphotyrosine(INSR)HMM predict
715Phosphothreonine(CK2)HMM predict
774Phosphotyrosine(SRC)HMM predict
774Phosphotyrosine(EGFR)HMM predict
774SulfotyrosineHMM predict
852N-linkedHMM predict
865Phosphoserine(ATM)HMM predict
873Phosphoserine(CK1)HMM predict
1040N-linkedHMM predict
1321N-linkedHMM predict
1322Phosphoserine(CK1)HMM predict
1354Phosphothreonine(PKC)HMM predict
1389N-linkedHMM predict
1395Phosphotyrosine(Syk)HMM predict
1399O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001009921
  • Location:chr3 186012624-186253095
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 186003847 186004145 298 8629
CTCF CD4SISSRdata 186003847 186004145 298 8629
CTCF HelaGSE12889 186003652 186004049 397 8774
CTCF JurkatGSE12889 186003681 186004085 404 8742
CTCF G2GSE9613 186003561 186004013 452 8838
CTCF G2GSE9613 186008429 186008702 273 4059
hScc1 G2GSE9613 186003561 186004013 452 8838
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 186265640 186265912 272 12681
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 186012445 186012813 368 0
CTCF G2GSE9613 186075560 186075890 330 0
CTCF G2GSE9613 186251387 186252684 1297 0
FoxA1 MCF7MACSdata 186212118 186212267 149 0
H3ac HepG2E 186012777 186014008 1231 0
Nanog hESGSE18292 186062061 186062270 209 0
Oct4 ESGSE20650 186100739 186101129 390 0
P300 T30-glioblastomaGSE21026 186015534 186016385 851 0
RARA MCF7GSE15244 186031429 186031942 513 0
USF1 HepG2E 186011567 186014590 3023 0
USF2 HepG2E 186011765 186014035 2270 0
hScc1 BcellGSE12603 186075560 186075820 260 0
hScc1 CdLSGSE12603 186075560 186076161 601 0
hScc1 G2GSE9613 186075560 186076161 601 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
19112 mRNA KIAA0804 chr3 186012660 186253094 1653 mRNA chr3 186031020 186032673 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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