AutismKB 2.0

Annotation Detail for LARP1


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Basic Information Top
Gene Symbol:LARP1 ( KIAA0731,LARP,MGC19556 )
Gene Full Name: La ribonucleoprotein domain family, member 1
Band: 5q33.2
Quick LinksEntrez ID:23367; OMIM: 612059; Uniprot ID:LARP1_HUMAN; ENSEMBL ID: ENSG00000155506; HGNC ID: 29531
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
75Phosphoserine.
90Phosphoserine.
143Phosphoserine.
165Phosphoserine.
228Phosphoserine (By similarity).
324Phosphoserine (By similarity).
327Phosphoserine (By similarity).
517Phosphoserine.
521Phosphoserine.
526Phosphothreonine.
546Phosphoserine.
548Phosphoserine.
622Phosphothreonine.
624Phosphothreonine.
627Phosphoserine.
631Phosphoserine.
633Phosphotyrosine.
649Phosphothreonine.
724Phosphothreonine.
766Phosphoserine.
774Phosphoserine.
785Phosphothreonine.
788Phosphothreonine.
823Phosphoserine.
824Phosphoserine.
845Phosphothreonine.
847Phosphoserine.
849Phosphoserine.
850Phosphoserine.
851Phosphoserine.
853Phosphoserine.
862Phosphotyrosine.
892N6-acetyllysine.
1017N6-acetyllysine.
1056Phosphoserine.
1071Phosphothreonine.
Location(AA) Modifications Resource
68PhosphothreoninePhospho.ELM 6.0
75PhosphoserinePhospho.ELM 6.0
90Phosphoserine.Swiss-Prot 53.0
90PhosphoserinePhospho.ELM 6.0
517Phosphoserine.Swiss-Prot 53.0
517PhosphoserinePhospho.ELM 6.0
521PhosphoserinePhospho.ELM 6.0
521Phosphoserine.Swiss-Prot 53.0
526PhosphothreoninePhospho.ELM 6.0
526Phosphothreonine.Swiss-Prot 53.0
546PhosphoserinePhospho.ELM 6.0
548PhosphoserinePhospho.ELM 6.0
548Phosphoserine.Swiss-Prot 53.0
627Phosphoserine.Swiss-Prot 53.0
627PhosphoserinePhospho.ELM 6.0
631Phosphoserine.Swiss-Prot 53.0
631PhosphoserinePhospho.ELM 6.0
766Phosphoserine.Swiss-Prot 53.0
766PhosphoserinePhospho.ELM 6.0
774PhosphoserinePhospho.ELM 6.0
774Phosphoserine.Swiss-Prot 53.0
785Phosphothreonine.Swiss-Prot 53.0
788Phosphothreonine.Swiss-Prot 53.0
788PhosphothreoninePhospho.ELM 6.0
824PhosphoserinePhospho.ELM 6.0
824Phosphoserine.Swiss-Prot 53.0
851Phosphoserine (By similarity).Swiss-Prot 53.0
851PhosphoserinePhospho.ELM 6.0
1056Phosphoserine (By similarity).Swiss-Prot 53.0
1071Phosphothreonine.Swiss-Prot 53.0
1071PhosphothreoninePhospho.ELM 6.0
Location(AA) Modification Resource
75PhosphoserineHMM predict
90Phosphoserine(CK2)HMM predict
148O-linkedHMM predict
165Phosphoserine(PKA)HMM predict
217Phosphoserine(IKK)HMM predict
217Phosphoserine(CK1)HMM predict
220Phosphoserine(CDK)HMM predict
220Phosphoserine(CDC2)HMM predict
228Phosphoserine(CK2)HMM predict
270Phosphoserine(PKA)HMM predict
273O-linkedHMM predict
296Phosphotyrosine(SRC)HMM predict
303Phosphothreonine(MAPK)HMM predict
323Phosphoserine(CK1)HMM predict
324Phosphoserine(CK1)HMM predict
338MethylarginineHMM predict
340MethylarginineHMM predict
352MethylarginineHMM predict
356MethylarginineHMM predict
361SulfotyrosineHMM predict
379Phosphotyrosine(INSR)HMM predict
382N-linkedHMM predict
389N-linkedHMM predict
491SulfotyrosineHMM predict
492Phosphoserine(ATM)HMM predict
521Phosphoserine(CDC2)HMM predict
521PhosphoserineHMM predict
521O-linkedHMM predict
526Phosphothreonine(MAPK)HMM predict
526PhosphothreonineHMM predict
526Phosphothreonine(CDK)HMM predict
554Phosphoserine(CK1)HMM predict
567Phosphoserine(CDC2)HMM predict
580Phosphoserine(CK1)HMM predict
584Phosphoserine(CK1)HMM predict
591Phosphoserine(ATM)HMM predict
631Phosphoserine(CK1)HMM predict
631Phosphoserine(CK2)HMM predict
633Phosphotyrosine(Syk)HMM predict
649Phosphothreonine(CDC2)HMM predict
664N-linkedHMM predict
686SulfotyrosineHMM predict
699Phosphotyrosine(SRC)HMM predict
700Phosphoserine(SRC)HMM predict
769O-linkedHMM predict
788Phosphothreonine(MAPK)HMM predict
788Phosphothreonine(CDK)HMM predict
797Phosphothreonine(PKC)HMM predict
820Phosphothreonine(PKA)HMM predict
820Phosphothreonine(PKC)HMM predict
824Phosphoserine(PKA)HMM predict
847Phosphoserine(PKB)HMM predict
847Phosphoserine(IKK)HMM predict
849O-linkedHMM predict
850O-linkedHMM predict
850Phosphoserine(CK1)HMM predict
851Phosphoserine(ATM)HMM predict
851Phosphoserine(CDC2)HMM predict
853O-linkedHMM predict
853Phosphoserine(CK1)HMM predict
856O-linkedHMM predict
861O-linkedHMM predict
932Phosphotyrosine(EGFR)HMM predict
1056Phosphoserine(CK1)HMM predict
1056Phosphoserine(IKK)HMM predict
1067O-linkedHMM predict
1067Phosphoserine(ATM)HMM predict
1071Phosphothreonine(MAPK)HMM predict
1071O-linkedHMM predict
1089Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_015315
  • Location:chr5 154072654-154177353
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 154072342 154072785 443 91
ER MCF7GSE19013 154060810 154061396 586 11552
FoxA1 MCF7MACSdata 154060850 154061245 395 11607
TFAP2C MCF7GSE21234 154060744 154061352 608 11607
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 154114670 154114900 230 0
FOXA1 MCF7GSE15244 154088950 154089459 509 0
PHF8 293TGSE20725 154114168 154115703 1535 0
Stat6 IL-4-hr1GSE17850 154097412 154097967 555 0
hScc1 BcellGSE12603 154114397 154114928 531 0
hScc1 CdLSGSE12603 154114512 154114928 416 0
p130 SenescentGSE19898 154114688 154114970 282 0
p130 shRbQuiescentGSE19898 154114337 154114833 496 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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