AutismKB 2.0

Annotation Detail for NCAPH


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Basic Information Top
Gene Symbol:NCAPH ( BRRN1,CAP-H,HCAP-H )
Gene Full Name: non-SMC condensin I complex, subunit H
Band: 2q11.2
Quick LinksEntrez ID:23397; OMIM: 602332; Uniprot ID:CND2_HUMAN; ENSEMBL ID: ENSG00000121152; HGNC ID: 1112
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
15Phosphoserine.
49Phosphothreonine.
70Phosphoserine.
78Phosphoserine.
81Phosphoserine.
87Phosphoserine.
92Phosphoserine.
96Phosphoserine.
201Phosphoserine.
335Phosphoserine.
408Phosphoserine.
432Phosphoserine.
605Phosphothreonine.
614Phosphothreonine.
637N6-acetyllysine.
Location(AA) Modifications Resource
30PhosphoserinePhospho.ELM 6.0
49PhosphothreoninePhospho.ELM 6.0
49Phosphothreonine.Swiss-Prot 53.0
78PhosphoserinePhospho.ELM 6.0
78Phosphoserine.Swiss-Prot 53.0
81PhosphoserinePhospho.ELM 6.0
81Phosphoserine.Swiss-Prot 53.0
92PhosphoserinePhospho.ELM 6.0
92Phosphoserine.Swiss-Prot 53.0
96PhosphoserinePhospho.ELM 6.0
96Phosphoserine.Swiss-Prot 53.0
201PhosphoserinePhospho.ELM 6.0
201Phosphoserine.Swiss-Prot 53.0
335PhosphoserinePhospho.ELM 6.0
335Phosphoserine.Swiss-Prot 53.0
605Phosphothreonine.Swiss-Prot 53.0
605PhosphothreoninePhospho.ELM 6.0
Location(AA) Modification Resource
13N-linkedHMM predict
14N-linkedHMM predict
17Phosphoserine(CK1)HMM predict
19Phosphothreonine(PKC)HMM predict
25Phosphoserine(IKK)HMM predict
28Phosphoserine(CDC2)HMM predict
70Phosphoserine(PKA)HMM predict
87Phosphoserine(CDK)HMM predict
87Phosphoserine(MAPK)HMM predict
87PhosphoserineHMM predict
87Phosphoserine(CDC2)HMM predict
92Phosphoserine(IKK)HMM predict
92Phosphoserine(PKA)HMM predict
157Phosphothreonine(PKC)HMM predict
189Phosphoserine(CK1)HMM predict
231N-linkedHMM predict
233Phosphoserine(CK2)HMM predict
359Phosphoserine(CK2)HMM predict
432Phosphoserine(CDC2)HMM predict
457Phosphoserine(ATM)HMM predict
457Phosphoserine(CK1)HMM predict
532O-linkedHMM predict
544SulfotyrosineHMM predict
544Phosphotyrosine(INSR)HMM predict
544Phosphotyrosine(SRC)HMM predict
544Phosphotyrosine(Syk)HMM predict
544Phosphotyrosine(EGFR)HMM predict
552Phosphotyrosine(Jak)HMM predict
552Phosphotyrosine(INSR)HMM predict
552SulfotyrosineHMM predict
556N-linkedHMM predict
560N-linkedHMM predict
570Phosphoserine(ATM)HMM predict
570Phosphoserine(CK2)HMM predict
570Phosphoserine(CK2)HMM predict
605Phosphothreonine(MAPK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_015341
  • Location:chr2 96365210-96405000
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
PHF8 Hs68plusFBSGSE20725 96364580 96365742 1162 50
TAF k562GSE8489 96364061 96364651 590 855
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 96388744 96389059 315 0
CTCF CD4SISSRdata 96388744 96389059 315 0
CTCF JurkatGSE12889 96388896 96389060 164 0
CTCF G2GSE9613 96364995 96365560 565 0
CTCF G2GSE9613 96365836 96366124 288 0
CTCF G2GSE9613 96383540 96383683 143 0
CTCF G2GSE9613 96401407 96401681 274 0
E2F4 G0GSE7516 96364995 96366088 1093 0
FOXA1 MCF7GSE15244 96371416 96372023 607 0
FOXA1 MCF7GSE15244 96382561 96383350 789 0
Fos K562GSE19551 96371410 96372084 674 0
H3K4me2 HCT116GSE10453 96365799 96366844 1045 0
H3ac HepG2E 96364995 96366844 1849 0
LIN9 G0GSE7516 96364995 96366519 1524 0
LIN9 SGSE7516 96364995 96365882 887 0
P300 T30-glioblastomaGSE21026 96371185 96372228 1043 0
PHF8 293TGSE20725 96364663 96366151 1488 0
RARA MCF7GSE15244 96382297 96383350 1053 0
Rb GrowingGSE19898 96371666 96371926 260 0
TAF HelaGSE8489 96365695 96366844 1149 0
TAF k562GSE8489 96365628 96366844 1216 0
TAF k562GSE8489 96375342 96375699 357 0
p130 QuiescentGSE19898 96365051 96365663 612 0
p130 SenescentGSE19898 96364911 96365811 900 0
p130 shRbQuiescentGSE19898 96364930 96365812 882 0
p130 shRbSenescentGSE19898 96364946 96365893 947 0
p130 G0GSE7516 96364995 96365731 736 0
p130 SGSE7516 96365114 96365882 768 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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