AutismKB 2.0

Annotation Detail for NCS1


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Basic Information Top
Gene Symbol:NCS1 ( DKFZp761L1223,FLUP,FREQ )
Gene Full Name: neuronal calcium sensor 1
Band: 9q34.11
Quick LinksEntrez ID:23413; OMIM: 603315; Uniprot ID:NCS1_HUMAN; ENSEMBL ID: ENSG00000107130; HGNC ID: 3953
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
96Phosphothreonine(PKC)HMM predict
115Phosphotyrosine(INSR)HMM predict
144Phosphothreonine(CDC2)HMM predict
144Phosphothreonine(MAPK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014286
  • Location:chr9 131974677-132038723
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
hScc1 BcellGSE12603 131973881 131974160 279 657
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 132045302 132045565 263 6710
CTCF CD4SISSRdata 132045302 132045565 263 6710
CTCF HelaGSE12889 132045284 132045693 409 6765
CTCF JurkatGSE12889 132045365 132045542 177 6730
ETS1 JurkatGSE17954 132042462 132043397 935 4206
Fos K562GSE19551 132042552 132043258 706 4182
Fos K562GSE19551 132056402 132056899 497 17927
Myc K562GSE19551 132042548 132043369 821 4235
USF1 HepG2E 132041470 132042776 1306 3400
USF1 HepG2E 132043137 132043935 798 4813
USF1 HepG2E 132044310 132044529 219 5696
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 132038312 132038671 359 0
CTCF CD4SISSRdata 132038312 132038671 359 0
ER Breast-CancerGSE22609 132036373 132036932 559 0
ER MCF7GSE19013 131988893 131989951 1058 0
Fos K562GSE19551 131989233 131989706 473 0
Myc hESGSE17917 131974833 131975178 345 0
Rb GrowingGSE19898 131992090 131992254 164 0
Rb GrowingGSE19898 132001663 132001803 140 0
TFAP2C MCF7GSE21234 132016312 132016963 651 0
hScc1 BcellGSE12603 131974811 131975126 315 0
hScc1 BcellGSE12603 131993819 131994059 240 0
hScc1 BcellGSE12603 132003917 132004604 687 0
hScc1 BcellGSE12603 132034999 132035286 287 0
hScc1 BcellGSE12603 132037796 132039048 1252 0
hScc1 CdLSGSE12603 132037973 132038821 848 0
p130 SenescentGSE19898 131975465 131975844 379 0
p63 keratinocytesGSE17611 132014318 132015441 1123 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018