Annotation Detail for HARS2
Basic Information Top
| Gene Symbol: | HARS2 ( HARSL,HARSR,HO3 ) |
|---|---|
| Gene Full Name: | histidyl-tRNA synthetase 2, mitochondrial (putative) |
| Band: | 5q31.3 |
| Quick Links | Entrez ID:23438; OMIM: 600783; Uniprot ID:SYHM_HUMAN; ENSEMBL ID: ENSG00000112855; HGNC ID: 4817 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 67 | Phosphoserine. | |
| 444 | N6-acetyllysine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 67 | Phosphoserine. | Swiss-Prot 53.0 |
| 67 | Phosphoserine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 24 | S-palmitoyl | HMM predict |
| 67 | Phosphoserine(ATM) | HMM predict |
| 344 | Phosphothreonine(MAPK) | HMM predict |
| 400 | Phosphothreonine(PKC) | HMM predict |
| 504 | Serine | HMM predict |
- RefSeq ID: NM_012208
- Location:chr5 140051201-140059072
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| PHF8 | 293T | GSE20725 | 140050561 | 140051802 | 1241 | 20 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| GABP | k562 | GSE8489 | 140052018 | 140052331 | 313 | 0 |
| GABP | k562 | GSE8489 | 140054857 | 140055772 | 915 | 0 |
| H3K4me3 | colorectal | cancer | 140052018 | 140052331 | 313 | 0 |
| PHF8 | HeLa | GSE20725 | 140050668 | 140051850 | 1182 | 0 |
| TAF | Hela | GSE8489 | 140055343 | 140056117 | 774 | 0 |
| TAFII | hES | GSE17917 | 140050805 | 140051618 | 813 | 0 |
| p130 | shRbSenescent | GSE19898 | 140050780 | 140051699 | 919 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-let-7b | hsa-let-7b | 22 | 18668040 |
| hsa-let-7b* | hsa-let-7b | 22 | 18668040 |
| hsa-miR-1 | hsa-mir-1-2 | 18 | 18668040 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 18668040 |
| hsa-miR-155 | hsa-mir-155 | 21 | 18668040 |
| hsa-miR-155* | hsa-mir-155 | 21 | 18668040 |
| hsa-miR-16 | hsa-mir-16-1 | 13 | 18668040 |
| hsa-miR-16 | hsa-mir-16-2 | 3 | 18668040 |
| hsa-miR-30a | hsa-mir-30a | 6 | 18668040 |
| hsa-miR-30a* | hsa-mir-30a | 6 | 18668040 |
| hsa-miR-30b | hsa-mir-30b | 8 | 18668040 |
| hsa-miR-30b* | hsa-mir-30b | 8 | 18668040 |
| hsa-miR-30c | hsa-mir-30c-2 | 6 | 18668040 |
| hsa-miR-30c | hsa-mir-30c-1 | 1 | 18668040 |
| hsa-miR-30c-1* | hsa-mir-30c-1 | 1 | 18668040 |
| hsa-miR-30c-2* | hsa-mir-30c-2 | 6 | 18668040 |
| hsa-miR-30d | hsa-mir-30d | 8 | 18668040 |
| hsa-miR-30d* | hsa-mir-30d | 8 | 18668040 |
| hsa-miR-30e | hsa-mir-30e | 1 | 18668040 |
| hsa-miR-30e* | hsa-mir-30e | 1 | 18668040 |
| No data |
Cis-Nats regulation