Annotation Detail for SF3B3
Basic Information Top
| Gene Symbol: | SF3B3 ( KIAA0017,RSE1,SAP130,SF3b130,STAF130 ) |
|---|---|
| Gene Full Name: | splicing factor 3b, subunit 3, 130kDa |
| Band: | 16q22.1 |
| Quick Links | Entrez ID:23450; OMIM: 605592; Uniprot ID:SF3B3_HUMAN; ENSEMBL ID: ENSG00000189091; HGNC ID: 10770 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 109 | N6-acetyllysine. | |
| 126 | N6-acetyllysine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 21 | N-linked | HMM predict |
| 153 | Phosphothreonine(PKC) | HMM predict |
| 156 | Phosphoserine(CDC2) | HMM predict |
| 189 | Phosphotyrosine(Syk) | HMM predict |
| 242 | O-linked | HMM predict |
| 424 | Phosphotyrosine(Jak) | HMM predict |
| 450 | Phosphoserine(PKG) | HMM predict |
| 480 | N-linked | HMM predict |
| 503 | O-linked | HMM predict |
| 538 | Phosphothreonine(CDC2) | HMM predict |
| 639 | Phosphoserine(IKK) | HMM predict |
| 807 | Phosphotyrosine(Syk) | HMM predict |
| 995 | Phosphothreonine(PKC) | HMM predict |
| 1034 | Phosphothreonine(PKA) | HMM predict |
| 1034 | Phosphothreonine(PKC) | HMM predict |
| 1041 | Phosphotyrosine(INSR) | HMM predict |
| 1200 | Phosphothreonine(MAPK) | HMM predict |
- RefSeq ID: NM_012426
- Location:chr16 69115201-69163700
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| PHF8 | 293T | GSE20725 | 69114300 | 69115916 | 1616 | 94 |
| PHF8 | HeLa | GSE20725 | 69114337 | 69115927 | 1590 | 70 |
| PHF8 | Hs68plusFBS | GSE20725 | 69114345 | 69115970 | 1625 | 44 |
| Rb | Senescent | GSE19898 | 69114485 | 69115669 | 1184 | 125 |
| p130 | shRbSenescent | GSE19898 | 69114467 | 69115877 | 1410 | 30 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T30-glioblastoma | GSE21026 | 69168275 | 69169414 | 1139 | 5144 |
| CTCF | G2 | GSE9613 | 69166919 | 69167187 | 268 | 3353 |
| P300 | T30-glioblastoma | GSE21026 | 69167548 | 69169326 | 1778 | 4737 |
| hScc1 | Bcell | GSE12603 | 69166919 | 69167220 | 301 | 3369 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 69120869 | 69121184 | 315 | 0 |
| CTCF | CD4 | SISSRdata | 69120869 | 69121184 | 315 | 0 |
| H3K4me3 | colorectal | cancer | 69115315 | 69115876 | 561 | 0 |
| H3ac | HepG2 | E | 69116750 | 69117063 | 313 | 0 |
| NRSF | mAb | Jurkat | 69115284 | 69115876 | 592 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 69144684 | 69145532 | 848 | 0 |
| RARA | MCF7 | GSE15244 | 69115284 | 69115876 | 592 | 0 |
| TAF | Hela | GSE8489 | 69117879 | 69119087 | 1208 | 0 |
| TAF | Hela | GSE8489 | 69142600 | 69142782 | 182 | 0 |
| TAF | k562 | GSE8489 | 69116750 | 69117063 | 313 | 0 |
| TAF | k562 | GSE8489 | 69117579 | 69119087 | 1508 | 0 |
| TFAP2C | MCF7 | GSE21234 | 69152817 | 69153406 | 589 | 0 |
| p130 | Quiescent | GSE19898 | 69115145 | 69115415 | 270 | 0 |
| p130 | shRbQuiescent | GSE19898 | 69115155 | 69115799 | 644 | 0 |
Validated miRNA targets