AutismKB 2.0

Annotation Detail for GCAT


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Basic Information Top
Gene Symbol:GCAT ( KBL,MGC23053 )
Gene Full Name: glycine C-acetyltransferase
Band: 22q13.1
Quick LinksEntrez ID:23464; OMIM: 607422; Uniprot ID:KBL_HUMAN; ENSEMBL ID: ENSG00000100116; HGNC ID: 4188
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
265N6-(pyridoxal phosphate)lysine
Location(AA) Modifications Resource
Location(AA) Modification Resource
22Phosphoserine(PKG)HMM predict
22Phosphoserine(IKK)HMM predict
147Phosphothreonine(MAPK)HMM predict
260N-linkedHMM predict
327Phosphothreonine(PKC)HMM predict
397Phosphoserine(CK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014291
  • Location:chr22 36533900-36542848
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Fos K562GSE19551 36533570 36534144 574 44
PHF8 HeLaGSE20725 36533405 36534261 856 68
Rb QuiescentGSE19898 36533480 36533961 481 180
hScc1 BcellGSE12603 36533560 36534018 458 112
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 36543538 36543870 332 856
CTCF CD4SISSRdata 36543538 36543870 332 856
CTCF JurkatGSE12889 36543559 36543892 333 877
CTCF G2GSE9613 36543341 36543896 555 770
Myc K562GSE19551 36543648 36543997 349 974
hScc1 BcellGSE12603 36543341 36543940 599 792
hScc1 CdLSGSE12603 36543309 36544515 1206 1064
p130 QuiescentGSE19898 36543915 36544173 258 1196
p130 SenescentGSE19898 36543713 36544168 455 1092
p130 SenescentGSE19898 36544317 36544569 252 1595
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
hScc1 BcellGSE12603 36541526 36542905 1379 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018