Annotation Detail for CBX7

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Basic Information Top

Gene Symbol:	CBX7 ( - )
Gene Full Name:	chromobox homolog 7
Band:	22q13.1
Quick Links	Entrez ID:23492; OMIM: 608457; Uniprot ID:CBX7_HUMAN; ENSEMBL ID: ENSG00000100307; HGNC ID: 1557
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:0 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:7 results

No data

Location(AA)	Modification	Resource
67	Phosphoserine(PKC)	HMM predict
86	Phosphoserine(PKA)	HMM predict
113	Phosphoserine(CDC2)	HMM predict
217	O-linked	HMM predict
218	O-linked	HMM predict
221	O-linked	HMM predict
223	O-linked	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_175709
Location:chr22 37856733-37878483
strand:-

Upstream the gene:11 results
Downstream the gene:7 results
Inside the gene:17 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	37896827	37897312	485	18586
CTCF	CD4	SISSRdata	37896827	37897312	485	18586
CTCF	Hela	GSE12889	37896711	37897032	321	18388
CTCF	G2	GSE9613	37896832	37897217	385	18541
PHF8	HeLa	GSE20725	37877888	37879393	1505	157
hScc1	Bcell	GSE12603	37878346	37878969	623	174
hScc1	Bcell	GSE12603	37879499	37879729	230	1131
hScc1	Bcell	GSE12603	37895796	37896348	552	17589
hScc1	Bcell	GSE12603	37896832	37897217	385	18541
hScc1	CdLS	GSE12603	37896832	37897710	878	18788
hScc1	G2	GSE9613	37896832	37897493	661	18679

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	37843942	37844130	188	12698
CTCF	CD4	SISSRdata	37843942	37844130	188	12698
KLF4	hES	GSE17917	37850080	37850362	282	6513
NFkBII	GM12878	GSE19485	37842901	37844713	1812	12927
hScc1	Bcell	GSE12603	37847864	37848329	465	8637
hScc1	CdLS	GSE12603	37843887	37844265	378	12658
hScc1	CdLS	GSE12603	37847864	37848364	500	8620

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	37861127	37861304	177	0
CTCF	CD4	SISSRdata	37861127	37861304	177	0
CTCF	Hela	GSE12889	37861091	37861332	241	0
CTCF	Jurkat	GSE12889	37861160	37861291	131	0
CTCF	G2	GSE9613	37860785	37861731	946	0
NFkBII	GM10847	GSE19485	37874379	37875570	1191	0
NFkBII	GM12878	GSE19485	37874120	37875803	1683	0
NFkBII	GM18526	GSE19485	37874307	37875472	1165	0
USF1	HepG2	E	37865903	37866394	491	0
USF1	HepG2	E	37872641	37872931	290	0
USF2	HepG2	E	37865903	37866428	525	0
hScc1	Bcell	GSE12603	37859954	37860422	468	0
hScc1	Bcell	GSE12603	37860710	37861625	915	0
hScc1	Bcell	GSE12603	37869904	37870654	750	0
hScc1	Bcell	GSE12603	37871084	37872063	979	0
hScc1	CdLS	GSE12603	37860893	37861530	637	0
p130	Senescent	GSE19898	37856797	37856976	179	0

Validated miRNA targets

miR Walk:5 results
Tarbase V5.0:0 results

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-miR-125b	hsa-mir-125b-1	11	18056640
hsa-miR-125b	hsa-mir-125b-2	21	18056640
hsa-miR-421	hsa-mir-421	X	19802518
hsa-miR-9	hsa-mir-9-1	1	18686603
hsa-miR-9*	hsa-mir-9-1	1	18686603

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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