AutismKB 2.0

Annotation Detail for SKIV2L2


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Basic Information Top
Gene Symbol:SKIV2L2 ( Dob1,KIAA0052,MGC142069,Mtr4,fSAP118 )
Gene Full Name: superkiller viralicidic activity 2-like 2 (S. cerevisiae)
Band: 5q11.2
Quick LinksEntrez ID:23517; OMIM: NA; Uniprot ID:SK2L2_HUMAN; ENSEMBL ID: ENSG00000039123; HGNC ID: 18734
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
51N6-acetyllysine.
198N6-acetyllysine.
255DEIH box.
379N6-acetyllysine.
748N6-acetyllysine.
796N6-acetyllysine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
23Phosphothreonine(PKC)HMM predict
85Phosphoserine(CK2)HMM predict
122Phosphotyrosine(Syk)HMM predict
164O-linkedHMM predict
189Phosphoserine(CDC2)HMM predict
199Phosphotyrosine(INSR)HMM predict
199Phosphotyrosine(Syk)HMM predict
199Phosphotyrosine(SRC)HMM predict
203Phosphotyrosine(Syk)HMM predict
219N-linkedHMM predict
223O-linkedHMM predict
513Phosphoserine(PKG)HMM predict
517Phosphotyrosine(Jak)HMM predict
517Phosphotyrosine(INSR)HMM predict
608Phosphoserine(PKG)HMM predict
612Phosphotyrosine(Syk)HMM predict
612Phosphotyrosine(SRC)HMM predict
676N-linkedHMM predict
682N-linkedHMM predict
710Phosphoserine(PKG)HMM predict
881Phosphoserine(CK2)HMM predict
917N-linkedHMM predict
946Phosphoserine(PKG)HMM predict
958Phosphotyrosine(Syk)HMM predict
960Phosphoserine(CDC2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_015360
  • Location:chr5 54639372-54756561
  • strand:+
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 54675904 54676292 388 0
CTCF CD4GSE12889 54738772 54739029 257 0
CTCF CD4SISSRdata 54675904 54676292 388 0
CTCF CD4SISSRdata 54738772 54739029 257 0
CTCF G2GSE9613 54688402 54688784 382 0
ER Fulvestrant-MCF7GSE14664 54713374 54713412 38 0
ETS1 JurkatGSE17954 54638589 54640180 1591 0
FOXA1 MCF7GSE15244 54655639 54655870 231 0
FoxA1 MCF7MACSdata 54655643 54655959 316 0
H3K4me3 colorectalcancer 54639606 54640722 1116 0
H3ac HepG2E 54639535 54641498 1963 0
Myc K562GSE19551 54722003 54722322 319 0
NRSF mAbJurkat 54639508 54640654 1146 0
Oct1 HelaGSE14283 54693775 54693835 60 0
Oct1 HelaGSE14283 54713379 54713408 29 0
P300 T30-glioblastomaGSE21026 54638738 54640288 1550 0
PHF8 HeLaGSE20725 54638575 54640411 1836 0
PolII HeLaGSE12783 54638448 54640449 2001 0
TAF HelaGSE8489 54639237 54641878 2641 0
TAF k562GSE8489 54639313 54641643 2330 0
hScc1 BcellGSE12603 54738631 54738767 136 0
p130 QuiescentGSE19898 54639430 54639809 379 0
p130 SenescentGSE19898 54639294 54639916 622 0
p130 shRbQuiescentGSE19898 54639486 54640151 665 0
p130 shRbSenescentGSE19898 54638949 54639964 1015 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
20972 mRNA SKIV2L2 chr5 54639372 54756562 121 mRNA PPAP2A chr5 54756441 54866630Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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