AutismKB 2.0

Annotation Detail for TNPO3


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Basic Information Top
Gene Symbol:TNPO3 ( IPO12,MTR10A,TRN-SR,TRN-SR2,TRNSR )
Gene Full Name: transportin 3
Band: 7q32.1
Quick LinksEntrez ID:23534; OMIM: 610032; Uniprot ID:TNPO3_HUMAN; ENSEMBL ID: ENSG00000064419; HGNC ID: 17103
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
1N-acetylmethionine.
896Phosphothreonine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
66Phosphothreonine(PKC)HMM predict
89Phosphoserine(CK1)HMM predict
182O-linkedHMM predict
204S-palmitoylHMM predict
336Phosphotyrosine(Syk)HMM predict
336Phosphotyrosine(SRC)HMM predict
354Phosphotyrosine(INSR)HMM predict
404Phosphoserine(PKG)HMM predict
471N-linkedHMM predict
481Phosphotyrosine(Syk)HMM predict
481Phosphotyrosine(Jak)HMM predict
490N-linkedHMM predict
539Phosphotyrosine(Jak)HMM predict
588Phosphoserine(CDC2)HMM predict
620Phosphoserine(ATM)HMM predict
631Phosphoserine(ATM)HMM predict
696S-palmitoylHMM predict
697S-palmitoylHMM predict
699S-palmitoylHMM predict
804Phosphoserine(ATM)HMM predict
923Phosphothreonine(PKC)HMM predict
937Phosphothreonine(PKC)HMM predict
968Phosphoserine(CDC2)HMM predict
971AsparagineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_012470
  • Location:chr7 128382185-128482433
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 128483483 128483884 401 1250
GABP k562GSE8489 128480812 128484708 3896 327
GABP k562GSE8489 128486448 128487059 611 4320
Rb QuiescentGSE19898 128482375 128482543 168 26
Rb QuiescentGSE19898 128482592 128482809 217 267
p130 SenescentGSE19898 128482562 128482974 412 335
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 128481465 128482319 854 0
ETS1 JurkatGSE17954 128481347 128482897 1550 0
FOXA1 MCF7GSE15244 128481529 128482977 1448 0
H3K4me3 colorectalcancer 128480812 128482220 1408 0
H3ac HepG2E 128480812 128482467 1655 0
LIN9 SGSE7516 128481894 128482694 800 0
NFkBII GM12878GSE19485 128389823 128391544 1721 0
Nanog hESGSE18292 128468878 128469287 409 0
Oct1 HelaGSE14283 128428597 128428633 36 0
Oct1 HelaGSE14283 128431741 128431776 35 0
PHF8 293TGSE20725 128481584 128482911 1327 0
PHF8 HeLaGSE20725 128481567 128483134 1567 0
PHF8 Hs68minusFBSGSE20725 128481340 128483004 1664 0
PHF8 Hs68plusFBSGSE20725 128481347 128483010 1663 0
RARA MCF7GSE15244 128481287 128483120 1833 0
Rb GrowingGSE19898 128481975 128482466 491 0
Rb QuiescentGSE19898 128481687 128482321 634 0
Rb SenescentGSE19898 128481956 128482826 870 0
Rb shRbSenescenceGSE19898 128481966 128482182 216 0
TAF HelaGSE8489 128480919 128483305 2386 0
hScc1 BcellGSE12603 128436894 128437272 378 0
hScc1 BcellGSE12603 128481571 128482575 1004 0
hScc1 CdLSGSE12603 128481571 128482694 1123 0
p130 QuiescentGSE19898 128481813 128482053 240 0
p130 QuiescentGSE19898 128482092 128482729 637 0
p130 SenescentGSE19898 128481870 128482511 641 0
p130 shRbQuiescentGSE19898 128481581 128482990 1409 0
p130 shRbSenescentGSE19898 128481589 128482812 1223 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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