Annotation Detail for GTPBP4
Basic Information Top
| Gene Symbol: | GTPBP4 ( CRFG,FLJ10686,FLJ10690,FLJ39774,NGB,NOG1 ) |
|---|---|
| Gene Full Name: | GTP binding protein 4 |
| Band: | 10p15.3 |
| Quick Links | Entrez ID:23560; OMIM: NA; Uniprot ID:NOG1_HUMAN; ENSEMBL ID: ENSG00000107937; HGNC ID: 21535 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 2 | N-acetylalanine. | |
| 103 | N6-acetyllysine. | |
| 468 | Phosphoserine. | |
| 470 | Phosphoserine. | |
| 472 | Phosphoserine. | |
| 522 | N6-acetyllysine. | |
| 558 | Phosphoserine. | |
| 563 | Phosphoserine. | |
| 578 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 2 | N-acetylalanine. | Swiss-Prot 53.0 |
| 467 | Phosphoserine | Phospho.ELM 6.0 |
| 468 | Phosphoserine. | Swiss-Prot 53.0 |
| 469 | Phosphoserine | Phospho.ELM 6.0 |
| 470 | Phosphoserine. | Swiss-Prot 53.0 |
| 471 | Phosphoserine | Phospho.ELM 6.0 |
| 472 | Phosphoserine. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 201 | Phosphothreonine(PKC) | HMM predict |
| 300 | Phosphoserine(CK2) | HMM predict |
| 346 | Phosphothreonine(PKC) | HMM predict |
| 409 | Sulfotyrosine | HMM predict |
| 468 | Phosphoserine(ATM) | HMM predict |
| 472 | Phosphoserine(CK2) | HMM predict |
| 550 | Phosphothreonine(PKC) | HMM predict |
| 558 | Phosphoserine(IKK) | HMM predict |
| 558 | Phosphoserine(PKA) | HMM predict |
| 569 | Phosphoserine(IKK) | HMM predict |
| 573 | Phosphothreonine(CDC2) | HMM predict |
| 630 | Lysine | HMM predict |
- RefSeq ID: NM_012341
- Location:chr10 1024348-1053703
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 1024164 | 1024431 | 267 | 51 |
| CTCF | CD4 | SISSRdata | 1024164 | 1024431 | 267 | 51 |
| CTCF | Hela | GSE12889 | 1024190 | 1024393 | 203 | 57 |
| ER | MCF7 | GSE19013 | 1006192 | 1007084 | 892 | 17711 |
| FOXA1 | MCF7 | GSE15244 | 1006401 | 1006911 | 510 | 17693 |
| FoxA1 | MCF7 | MACSdata | 1007594 | 1007762 | 168 | 16671 |
| GABP | Hela | GSE8489 | 1011650 | 1012977 | 1327 | 12035 |
| GABP | Hela | GSE8489 | 1021542 | 1022571 | 1029 | 2292 |
| GABP | k562 | GSE8489 | 1022913 | 1023137 | 224 | 1324 |
| GABP | k562 | GSE8489 | 1023563 | 1023866 | 303 | 634 |
| Gata2 | K562 | GSE18868 | 1014772 | 1015220 | 448 | 9353 |
| H3K4me3 | colorectal | cancer | 1022913 | 1023137 | 224 | 1324 |
| H3ac | HepG2 | E | 1007416 | 1007716 | 300 | 16783 |
| H3ac | HepG2 | E | 1008435 | 1008757 | 322 | 15753 |
| H3ac | HepG2 | E | 1011609 | 1013012 | 1403 | 12038 |
| H3ac | HepG2 | E | 1022913 | 1023137 | 224 | 1324 |
| H3ac | HepG2 | E | 1023563 | 1025017 | 1454 | 59 |
| P300 | T0-glioblastoma | GSE21026 | 1023988 | 1024615 | 627 | 47 |
| PHF8 | HeLa | GSE20725 | 1023666 | 1025014 | 1348 | 9 |
| PHF8 | Hs68plusFBS | GSE20725 | 1023338 | 1025300 | 1962 | 30 |
| RARA | MCF7 | GSE15244 | 1019886 | 1020626 | 740 | 4093 |
| RARA | MCF7 | GSE15244 | 1021987 | 1022571 | 584 | 2070 |
| RARG | MCF7 | GSE15244 | 1006401 | 1006911 | 510 | 17693 |
| RARG | MCF7 | GSE15244 | 1009602 | 1010563 | 961 | 14266 |
| RARG | MCF7 | GSE15244 | 1011509 | 1012794 | 1285 | 12197 |
| RARG | MCF7 | GSE15244 | 1020176 | 1020626 | 450 | 3948 |
| RARG | MCF7 | GSE15244 | 1022081 | 1022571 | 490 | 2023 |
| USF2 | HepG2 | E | 1006401 | 1006617 | 216 | 17840 |
| USF2 | HepG2 | E | 1009839 | 1010528 | 689 | 14165 |
| USF2 | HepG2 | E | 1011687 | 1012428 | 741 | 12291 |
| hScc1 | Bcell | GSE12603 | 1023563 | 1024529 | 966 | 303 |
| p130 | Senescent | GSE19898 | 1023880 | 1024699 | 819 | 59 |
| p130 | shRbQuiescent | GSE19898 | 1023432 | 1024777 | 1345 | 244 |
| p130 | shRbSenescent | GSE19898 | 1024073 | 1024544 | 471 | 40 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 1023765 | 1025100 | 1335 | 0 |
| GABP | Hela | GSE8489 | 1025370 | 1025655 | 285 | 0 |
| GABP | Hela | GSE8489 | 1026687 | 1027279 | 592 | 0 |
| GABP | Hela | GSE8489 | 1052618 | 1053108 | 490 | 0 |
| GABP | k562 | GSE8489 | 1025370 | 1025655 | 285 | 0 |
| GABP | k562 | GSE8489 | 1025988 | 1026343 | 355 | 0 |
| H3K4me3 | colorectal | cancer | 1024637 | 1025017 | 380 | 0 |
| H3K4me3 | colorectal | cancer | 1025370 | 1025655 | 285 | 0 |
| H3ac | HepG2 | E | 1025370 | 1025655 | 285 | 0 |
| H3ac | HepG2 | E | 1025988 | 1026343 | 355 | 0 |
| H3ac | HepG2 | E | 1026687 | 1027390 | 703 | 0 |
| Nanog | hES | GSE18292 | 1049645 | 1049823 | 178 | 0 |
| PHF8 | 293T | GSE20725 | 1023737 | 1025024 | 1287 | 0 |
| Rb | shRbQuiescent | GSE19898 | 1042676 | 1042829 | 153 | 0 |
| TAF | k562 | GSE8489 | 1025370 | 1025655 | 285 | 0 |
| TFAP2C | MCF7 | GSE21234 | 1040245 | 1040629 | 384 | 0 |
| hScc1 | Bcell | GSE12603 | 1046739 | 1047137 | 398 | 0 |
| p130 | shRbSenescent | GSE19898 | 1024576 | 1024787 | 211 | 0 |
Validated miRNA targets