AutismKB 2.0

Annotation Detail for CARHSP1


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Basic Information Top
Gene Symbol:CARHSP1 ( CRHSP-24,CSDC1,MGC111446 )
Gene Full Name: calcium regulated heat stable protein 1, 24kDa
Band: 16p13.2
Quick LinksEntrez ID:23589; OMIM: NA; Uniprot ID:CHSP1_HUMAN; ENSEMBL ID: ENSG00000153048; HGNC ID: 17150
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
30Phosphoserine.
32Phosphoserine.
41Phosphoserine.
52Phosphoserine.
146Phosphoserine.
147Phosphoserine.
Location(AA) Modifications Resource
30Phosphoserine.Swiss-Prot 53.0
32Phosphoserine.Swiss-Prot 53.0
41Phosphoserine.Swiss-Prot 53.0
41PhosphoserinePhospho.ELM 6.0
50PhosphothreoninePhospho.ELM 6.0
52Phosphoserine.Swiss-Prot 53.0
52PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
17Phosphoserine(CAMK2)HMM predict
23Phosphothreonine(MAPK)HMM predict
30Phosphoserine(IKK)HMM predict
30PhosphoserineHMM predict
32Phosphoserine(CDC2)HMM predict
32Phosphoserine(CDK)HMM predict
41Phosphoserine(CDK)HMM predict
41Phosphoserine(CDC2)HMM predict
45Phosphothreonine(PKC)HMM predict
48Phosphothreonine(PKA)HMM predict
54O-linkedHMM predict
54O-linkedHMM predict
58Phosphoserine(PKG)HMM predict
71S-palmitoylHMM predict
99Phosphotyrosine(EGFR)HMM predict
99Phosphotyrosine(SRC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001042476
  • Location:chr16 8854302-8869748
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 8856760 8856924 164 0
CTCF CD4SISSRdata 8856760 8856924 164 0
CTCF G2GSE9613 8856569 8856964 395 0
CTCF G2GSE9613 8859431 8859765 334 0
CTCF G2GSE9613 8864775 8866036 1261 0
CTCF G2GSE9613 8869514 8869956 442 0
H3K4me3 colorectalcancer 8869259 8869398 139 0
H3ac HepG2E 8868180 8869687 1507 0
Myc hESGSE17917 8867691 8868015 324 0
P300 T0-glioblastomaGSE21026 8861493 8862562 1069 0
P300 T30-glioblastomaGSE21026 8861239 8862145 906 0
hScc1 BcellGSE12603 8868566 8869108 542 0
hScc1 BcellGSE12603 8869451 8870031 580 0
p63 keratinocytesGSE17611 8865158 8865983 825 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7b hsa-let-7b 22 18668040
hsa-let-7b* hsa-let-7b 22 18668040
hsa-miR-1 hsa-mir-1-2 18 18668040
hsa-miR-1 hsa-mir-1-1 20 18668040
hsa-miR-155 hsa-mir-155 21 18668040
hsa-miR-155* hsa-mir-155 21 18668040
hsa-miR-16 hsa-mir-16-1 13 18668040
hsa-miR-16 hsa-mir-16-2 3 18668040
hsa-miR-30a hsa-mir-30a 6 18668040
hsa-miR-30a* hsa-mir-30a 6 18668040
hsa-miR-30b hsa-mir-30b 8 18668040
hsa-miR-30b* hsa-mir-30b 8 18668040
hsa-miR-30c hsa-mir-30c-2 6 18668040
hsa-miR-30c hsa-mir-30c-1 1 18668040
hsa-miR-30c-1* hsa-mir-30c-1 1 18668040
hsa-miR-30c-2* hsa-mir-30c-2 6 18668040
hsa-miR-30d hsa-mir-30d 8 18668040
hsa-miR-30d* hsa-mir-30d 8 18668040
hsa-miR-30e hsa-mir-30e 1 18668040
hsa-miR-30e* hsa-mir-30e 1 18668040
ID in Tarbase Data Type Support Type miRNA Gene Direct Support Publication
840 Unknown pSILAC let-7b CARHSP1 down 50-25% 18668040
Ensembl Protein Type Differentially expressed in Pathology or Event Mis Regulation Gene Expression Tumour Involvement
ENSG00000153048 n_a n_a n_a "lymphoblast, lymphocyte, muscle cell" "benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma"
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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