AutismKB 2.0

Annotation Detail for PDSS1


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Basic Information Top
Gene Symbol:PDSS1 ( COQ1,DPS,MGC70953,RP13-16H11.3,SPS,TPRT,TPT,hDPS1 )
Gene Full Name: prenyl (decaprenyl) diphosphate synthase, subunit 1
Band: 10p12.1
Quick LinksEntrez ID:23590; OMIM: 607429; Uniprot ID:DPS1_HUMAN; ENSEMBL ID: ENSG00000148459; HGNC ID: 17759
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
57Phosphotyrosine (By similarity).
Location(AA) Modifications Resource
Location(AA) Modification Resource
20PhosphoserineHMM predict
25PhosphoserineHMM predict
25Phosphoserine(CDC2)HMM predict
25Phosphoserine(CDK)HMM predict
28MethylarginineHMM predict
81Phosphothreonine(CDC2)HMM predict
81O-linkedHMM predict
128SulfotyrosineHMM predict
153N-linkedHMM predict
154N-linkedHMM predict
224N-linkedHMM predict
314Phosphoserine(IKK)HMM predict
397Phosphoserine(CDC2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014317
  • Location:chr10 27026600-27075729
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
GABP HelaGSE8489 27012814 27013483 669 13452
GABP HelaGSE8489 27025207 27026081 874 957
GABP k562GSE8489 27025280 27026157 877 882
Jun K562GSE19551 27010927 27011092 165 15591
PHF8 293TGSE20725 27025696 27027243 1547 131
PHF8 HeLaGSE20725 27025730 27027141 1411 165
PHF8 Hs68plusFBSGSE20725 27025836 27027150 1314 108
RARG MCF7GSE15244 27025764 27026254 490 592
Rb SenescentGSE19898 27026459 27026651 192 46
hScc1 BcellGSE12603 27013662 27013987 325 12776
hScc1 CdLSGSE12603 27013593 27014112 519 12748
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 27055063 27055305 242 0
CTCF CD4SISSRdata 27055063 27055305 242 0
ETS1 JurkatGSE17954 27025789 27027572 1783 0
H3K4me3 colorectalcancer 27027036 27027325 289 0
H3ac HepG2E 27026960 27027751 791 0
H3ac HepG2E 27028104 27028292 188 0
H3ac HepG2E 27063683 27064639 956 0
Rb GrowingGSE19898 27026851 27027066 215 0
USF2 HepG2E 27063152 27063385 233 0
hScc1 BcellGSE12603 27054909 27055596 687 0
hScc1 CdLSGSE12603 27054873 27055669 796 0
p130 shRbSenescentGSE19898 27026455 27026997 542 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
2931 mRNA TPRT chr10 27026600 27075730 198 mRNA ABI1 chr10 27075532 27189965Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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