AutismKB 2.0

Annotation Detail for SSBP2


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Basic Information Top
Gene Symbol:SSBP2 ( DKFZp686F03273,HSPC116,SOSS-B2 )
Gene Full Name: single-stranded DNA binding protein 2
Band: 5q14.1
Quick LinksEntrez ID:23635; OMIM: 607389; Uniprot ID:SSBP2_HUMAN; ENSEMBL ID: ENSG00000145687; HGNC ID: 15831
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
321Phosphoserine.
333Phosphothreonine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
8N-linkedHMM predict
51N-linkedHMM predict
81Phosphothreonine(PKC)HMM predict
81Phosphothreonine(PKA)HMM predict
152Phosphoserine(ATM)HMM predict
179Phosphothreonine(CDC2)HMM predict
223N-linkedHMM predict
226N-linkedHMM predict
228N-linkedHMM predict
234O-linkedHMM predict
240Phosphotyrosine(Abl)HMM predict
240Phosphotyrosine(INSR)HMM predict
240Phosphotyrosine(Jak)HMM predict
257Phosphoserine(CDC2)HMM predict
269Phosphotyrosine(INSR)HMM predict
326Phosphoserine(CK1)HMM predict
354Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_012446
  • Location:chr5 80751428-81082827
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 81100241 81101381 1140 17984
GABP k562GSE8489 81096256 81096522 266 13562
P300 T30-glioblastomaGSE21026 81100227 81101470 1243 18021
PHF8 HeLaGSE20725 81082259 81083719 1460 162
PHF8 Hs68plusFBSGSE20725 81082174 81083761 1587 140
Rb GrowingGSE19898 81082774 81083046 272 83
TAF HelaGSE8489 81083855 81084316 461 1258
TAF k562GSE8489 81083744 81084761 1017 1425
TAF k562GSE8489 81091041 81092328 1287 8857
p130 QuiescentGSE19898 81082519 81083373 854 119
p130 SenescentGSE19898 81083483 81083821 338 825
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 80753953 80754915 962 0
CTCF CD4GSE12889 80838519 80838896 377 0
CTCF CD4SISSRdata 80838519 80838896 377 0
CTCF G2GSE9613 80757085 80757453 368 0
CTCF G2GSE9613 81081455 81081788 333 0
CTCF G2GSE9613 81082164 81083261 1097 0
ER E2-MCF7GSE14664 80951532 80951570 38 0
FoxA1 MCF7MACSdata 80876216 80876485 269 0
FoxA1 MCF7MACSdata 80989143 80989285 142 0
Myc K562GSE19551 80838574 80838851 277 0
NRSF pAbJurkat 81082133 81082731 598 0
Nanog hESGSE18292 80921972 80922435 463 0
Oct1 H2O2-HelaGSE14283 80884729 80884759 30 0
Oct1 H2O2-HelaGSE14283 80962620 80962668 48 0
Oct1 H2O2-HelaGSE14283 81002973 81003003 30 0
Oct1 HelaGSE14283 80884728 80884759 31 0
Oct1 HelaGSE14283 80951525 80951558 33 0
Oct1 HelaGSE14283 80962620 80962668 48 0
Oct1 HelaGSE14283 81002965 81003012 47 0
P300 T30-glioblastomaGSE21026 80753844 80755211 1367 0
Rb GrowingGSE19898 81082588 81082741 153 0
Rb SenescentGSE19898 81082465 81083057 592 0
Stat6 IL-4-hr1GSE17850 80962567 80963183 616 0
TFAP2C MCF7GSE21234 80989074 80989395 321 0
TFAP2C MCF7GSE21234 80998382 80999071 689 0
TFAP2C MCF7GSE21234 81007467 81007814 347 0
hScc1 BcellGSE12603 80757050 80757494 444 0
hScc1 BcellGSE12603 80838505 80839027 522 0
hScc1 BcellGSE12603 81081187 81081788 601 0
hScc1 BcellGSE12603 81082133 81083237 1104 0
hScc1 CdLSGSE12603 80757015 80757531 516 0
hScc1 CdLSGSE12603 80838505 80839027 522 0
hScc1 CdLSGSE12603 81081187 81081788 601 0
hScc1 CdLSGSE12603 81082133 81083261 1128 0
hScc1 G2GSE9613 80757050 80757531 481 0
p130 SenescentGSE19898 81082485 81083135 650 0
p130 shRbQuiescentGSE19898 81082367 81083055 688 0
p130 shRbSenescentGSE19898 81082389 81083160 771 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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