AutismKB 2.0

Annotation Detail for TRIM29


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Basic Information Top
Gene Symbol:TRIM29 ( ATDC,FLJ36085 )
Gene Full Name: tripartite motif-containing 29
Band: 11q23.3
Quick LinksEntrez ID:23650; OMIM: 610658; Uniprot ID:TRI29_HUMAN; ENSEMBL ID: ENSG00000137699; HGNC ID: 17274
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
9Phosphoserine (By similarity).
13Phosphoserine (By similarity).
21Phosphoserine.
23Phosphoserine.
58Phosphoserine.
104Phosphoserine.
106Phosphotyrosine.
474Phosphotyrosine.
476Phosphothreonine.
489Phosphoserine.
Location(AA) Modifications Resource
104Phosphoserine.Swiss-Prot 53.0
489Phosphoserine.Swiss-Prot 53.0
Location(AA) Modification Resource
10N-linkedHMM predict
13Phosphoserine(CDC2)HMM predict
21Phosphoserine(CDK)HMM predict
21Phosphoserine(IKK)HMM predict
21Phosphoserine(CDC2)HMM predict
23Phosphoserine(IKK)HMM predict
23Phosphoserine(PKB)HMM predict
23Phosphoserine(ATM)HMM predict
23Phosphoserine(PKA)HMM predict
23PhosphoserineHMM predict
31N-linkedHMM predict
93Phosphotyrosine(INSR)HMM predict
148Phosphothreonine(PKC)HMM predict
152Phosphoserine(PKG)HMM predict
152Phosphoserine(PKA)HMM predict
152Phosphoserine(PKB)HMM predict
166Phosphoserine(PKG)HMM predict
166PhosphoserineHMM predict
166Phosphoserine(PKB)HMM predict
166Phosphoserine(IKK)HMM predict
190S-palmitoylHMM predict
254N-linkedHMM predict
369Phosphoserine(IKK)HMM predict
386N-linkedHMM predict
450Phosphotyrosine(INSR)HMM predict
453N-linkedHMM predict
456N-linkedHMM predict
467Phosphothreonine(PKC)HMM predict
484Phosphoserine(PKG)HMM predict
489Phosphoserine(CDC2)HMM predict
511N-linkedHMM predict
540Phosphoserine(CK1)HMM predict
550Phosphoserine(ATM)HMM predict
552Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_012101
  • Location:chr11 119487203-119514072
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 119484110 119484399 289 2949
CTCF CD4SISSRdata 119484110 119484399 289 2949
CTCF HelaGSE12889 119484199 119484394 195 2907
CTCF JurkatGSE12889 119484119 119484438 319 2925
Nanog hESGSE18292 119473658 119474052 394 13349
Rb SenescentGSE19898 119484069 119484460 391 2939
Sox2 hESGSE18292 119473721 119473961 240 13363
hScc1 BcellGSE12603 119483839 119485529 1690 2520
hScc1 BcellGSE12603 119486628 119486929 301 425
hScc1 CdLSGSE12603 119483974 119484699 725 2867
hScc1 G2GSE9613 119471238 119471885 647 15642
hScc1 G2GSE9613 119483974 119484699 725 2867
p130 SenescentGSE19898 119484206 119484459 253 2871
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 119506632 119507098 466 0
Fos K562GSE19551 119500747 119501380 633 0
NRSF pAbJurkat 119487848 119488328 480 0
NRSF pAbJurkat 119497931 119498624 693 0
NRSF pAbJurkat 119499599 119500271 672 0
NRSF pAbJurkat 119512385 119512578 193 0
TFAP2C MCF7GSE21234 119497109 119498467 1358 0
TFAP2C MCF7GSE21234 119499829 119500327 498 0
TFAP2C MCF7GSE21234 119500683 119501436 753 0
hScc1 BcellGSE12603 119498929 119499216 287 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-1 hsa-mir-1-2 18 15685193
hsa-miR-1 hsa-mir-1-1 20 15685193
hsa-miR-124 hsa-mir-124-1 8 15685193
hsa-miR-124 hsa-mir-124-2 8 15685193
hsa-miR-124 hsa-mir-124-3 20 15685193
hsa-miR-373 hsa-mir-373 19 15685193
hsa-miR-373* hsa-mir-373 19 15685193
ID in Tarbase Data Type Support Type miRNA Gene Direct Support Publication
373 Unknown MicroArray miR-124 TRIM29 n_a 15685193
Ensembl Protein Type Differentially expressed in Pathology or Event Mis Regulation Gene Expression Tumour Involvement
ENSG00000137699 G1-to-S transition n_a n_a "epithelium, muscle cell" "tumour, malignant tumour, carcinoma, leukaemia, sarcoma"
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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