Annotation Detail for SLC7A11
Basic Information Top
Gene Symbol: | SLC7A11 ( CCBR1,xCT ) |
---|---|
Gene Full Name: | solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 |
Band: | 4q28.3 |
Quick Links | Entrez ID:23657; OMIM: 607933; Uniprot ID:XCT_HUMAN; ENSEMBL ID: ENSG00000151012; HGNC ID: 11059 |
Relate to Another Database: | SFARIGene; denovo-db |
Location(AA) | Modification | |
---|---|---|
26 | Phosphoserine. | |
314 | N-linked (GlcNAc...) (Potential). |
Location(AA) | Modifications | Resource |
---|---|---|
26 | Phosphoserine. | Swiss-Prot 53.0 |
26 | Phosphoserine | Phospho.ELM 6.0 |
314 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
Location(AA) | Modification | Resource |
---|---|---|
8 | O-linked | HMM predict |
45 | Phosphothreonine(PKA) | HMM predict |
65 | Phosphoserine(CDC2) | HMM predict |
183 | Phosphoserine(CK1) | HMM predict |
364 | Phosphothreonine(MAPK) | HMM predict |
449 | O-linked | HMM predict |
- RefSeq ID: NM_014331
- Location:chr4 139304699-139382952
- strand:-
Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
---|---|---|---|---|---|---|
FOXA1 | MCF7 | GSE15244 | 139397340 | 139397695 | 355 | 14565 |
FOXA1 | eGFP | GSE10845 | 139397340 | 139397695 | 355 | 14565 |
FoxA1 | MCF7 | MACSdata | 139397174 | 139397519 | 345 | 14394 |
TAF | Hela | GSE8489 | 139399007 | 139399231 | 224 | 16167 |
hScc1 | Bcell | GSE12603 | 139382823 | 139383136 | 313 | 27 |
Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
---|---|---|---|---|---|---|
Nanog | ES | GSE20650 | 139302871 | 139303141 | 270 | 1694 |
Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
---|---|---|---|---|---|---|
CBP | T0-glioblastoma | GSE21026 | 139375919 | 139376983 | 1064 | 0 |
CBP | T30-glioblastoma | GSE21026 | 139375732 | 139377087 | 1355 | 0 |
CTCF | G2 | GSE9613 | 139323387 | 139323981 | 594 | 0 |
CTCF | G2 | GSE9613 | 139336790 | 139337003 | 213 | 0 |
CTCF | G2 | GSE9613 | 139381991 | 139382988 | 997 | 0 |
ER | E2-MCF7 | GSE14664 | 139325834 | 139325884 | 50 | 0 |
ER | E2-MCF7 | GSE14664 | 139330673 | 139330705 | 32 | 0 |
H3K4me2 | HCT116 | GSE10453 | 139382142 | 139382859 | 717 | 0 |
H3ac | HepG2 | E | 139381197 | 139383098 | 1901 | 0 |
Myc | K562 | GSE19551 | 139382166 | 139383290 | 1124 | 0 |
P300 | T0-glioblastoma | GSE21026 | 139375963 | 139377750 | 1787 | 0 |
P300 | T30-glioblastoma | GSE21026 | 139375738 | 139377327 | 1589 | 0 |
Pol2 | GM12878 | GSE19551 | 139381913 | 139383316 | 1403 | 0 |
PolII | HeLa | GSE12783 | 139381005 | 139384453 | 3448 | 0 |
TAF | Hela | GSE8489 | 139381197 | 139383330 | 2133 | 0 |
TAF | k562 | GSE8489 | 139381197 | 139383519 | 2322 | 0 |
hScc1 | Bcell | GSE12603 | 139323423 | 139323838 | 415 | 0 |
hScc1 | Bcell | GSE12603 | 139382030 | 139382414 | 384 | 0 |
p130 | shRbSenescent | GSE19898 | 139382468 | 139383384 | 916 | 0 |
Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
---|---|---|---|
hsa-let-7b | hsa-let-7b | 22 | 18668040 |
hsa-let-7b* | hsa-let-7b | 22 | 18668040 |
hsa-miR-1 | hsa-mir-1-2 | 18 | 18668040 |
hsa-miR-1 | hsa-mir-1-1 | 20 | 18668040 |
hsa-miR-122 | hsa-mir-122 | 18 | 19296470 |
hsa-miR-122* | hsa-mir-122 | 18 | 19296470 |
hsa-miR-155 | hsa-mir-155 | 21 | 18668040 |
hsa-miR-155* | hsa-mir-155 | 21 | 18668040 |
hsa-miR-16 | hsa-mir-16-1 | 13 | 18668040 |
hsa-miR-16 | hsa-mir-16-2 | 3 | 18668040 |
hsa-miR-30a | hsa-mir-30a | 6 | 18668040 |
hsa-miR-30a* | hsa-mir-30a | 6 | 18668040 |
hsa-miR-30b | hsa-mir-30b | 8 | 18668040 |
hsa-miR-30b* | hsa-mir-30b | 8 | 18668040 |
hsa-miR-30c | hsa-mir-30c-2 | 6 | 18668040 |
hsa-miR-30c | hsa-mir-30c-1 | 1 | 18668040 |
hsa-miR-30c-1* | hsa-mir-30c-1 | 1 | 18668040 |
hsa-miR-30c-2* | hsa-mir-30c-2 | 6 | 18668040 |
hsa-miR-30d | hsa-mir-30d | 8 | 18668040 |
hsa-miR-30d* | hsa-mir-30d | 8 | 18668040 |
hsa-miR-30e | hsa-mir-30e | 1 | 18668040 |
hsa-miR-30e* | hsa-mir-30e | 1 | 18668040 |
ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
---|---|---|---|---|---|---|
1281 | Unknown | pSILAC | miR-30 | SLC7A11 | down 50-25% | 18668040 |
Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
ENSG00000151012 | n_a | n_a | n_a | "leukocyte, muscle cell" | "malignant tumour, leukaemia" |
Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
---|---|---|---|---|---|---|---|---|---|---|---|---|
20234 | mRNA | chr4 | 139367803 | 139456936 | 174 | mRNA | SLC7A11 | chr4 | 139449092 | 139520828 | Sense/Antisense (SA) pairs | |