AutismKB 2.0

Annotation Detail for TMEM2


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Basic Information Top
Gene Symbol:TMEM2 ( - )
Gene Full Name: transmembrane protein 2
Band: 9q21.13
Quick LinksEntrez ID:23670; OMIM: 605835; Uniprot ID:TMEM2_HUMAN; ENSEMBL ID: ENSG00000135048; HGNC ID: 11869
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
10Phosphoserine.
63Phosphoserine.
292N-linked (GlcNAc...) (Potential).
368Phosphotyrosine.
384Phosphotyrosine.
914N-linked (GlcNAc...) (Potential).
1234N-linked (GlcNAc...) (Potential).
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_013390
  • Location:chr9 73488102-73573227
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 73587832 73588480 648 14929
CTCF CD4GSE12889 73587891 73588278 387 14857
CTCF CD4SISSRdata 73587891 73588278 387 14857
ER Breast-CancerGSE22609 73576815 73577376 561 3868
ER MCF7GSE19013 73576756 73577313 557 3807
ER MCF7GSE19013 73583994 73584889 895 11214
ER MCF7GSE19013 73587659 73588504 845 14854
P300 T30-glioblastomaGSE21026 73587763 73588582 819 14945
PHF8 293TGSE20725 73572844 73573981 1137 185
TFAP2C MCF7GSE21234 73573059 73573447 388 26
TFAP2C MCF7GSE21234 73587665 73588460 795 14835
hScc1 BcellGSE12603 73573525 73574356 831 713
hScc1 CdLSGSE12603 73573461 73574675 1214 841
hScc1 G2GSE9613 73573461 73574356 895 681
p130 SenescentGSE19898 73573000 73573471 471 8
p130 shRbQuiescentGSE19898 73573001 73573501 500 24
p63 keratinocytesGSE17611 73587652 73588592 940 14895
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-let-7b hsa-let-7b 22 18668040
hsa-let-7b* hsa-let-7b 22 18668040
hsa-miR-1 hsa-mir-1-2 18 18668040
hsa-miR-1 hsa-mir-1-1 20 18668040
hsa-miR-155 hsa-mir-155 21 18668040
hsa-miR-155* hsa-mir-155 21 18668040
hsa-miR-16 hsa-mir-16-1 13 18668040
hsa-miR-16 hsa-mir-16-2 3 18668040
hsa-miR-30a hsa-mir-30a 6 18668040
hsa-miR-30a* hsa-mir-30a 6 16239240
hsa-miR-30a* hsa-mir-30a 6 18668040
hsa-miR-30b hsa-mir-30b 8 18668040
hsa-miR-30b* hsa-mir-30b 8 18668040
hsa-miR-30c hsa-mir-30c-2 6 18668040
hsa-miR-30c hsa-mir-30c-1 1 18668040
hsa-miR-30c-1* hsa-mir-30c-1 1 18668040
hsa-miR-30c-2* hsa-mir-30c-2 6 18668040
hsa-miR-30d hsa-mir-30d 8 18668040
hsa-miR-30d* hsa-mir-30d 8 18668040
hsa-miR-30e hsa-mir-30e 1 18668040
hsa-miR-30e* hsa-mir-30e 1 18668040
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018