AutismKB 2.0

Annotation Detail for BRD1


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Basic Information Top
Gene Symbol:BRD1 ( BRL,BRPF1,BRPF2,DKFZp686F0325 )
Gene Full Name: bromodomain containing 1
Band: 22q13.33
Quick LinksEntrez ID:23774; OMIM: 604589; Uniprot ID:BRD1_HUMAN; ENSEMBL ID: ENSG00000100425; HGNC ID: 1102
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
25Phosphoserine.
128Phosphoserine.
368N6-acetyllysine.
418N6-acetyllysine.
516N6-acetyllysine.
519N6-acetyllysine.
523N6-acetyllysine.
903N6-acetyllysine.
1051Phosphothreonine.
1052Phosphoserine.
1055Phosphoserine.
Location(AA) Modifications Resource
25Phosphoserine.Swiss-Prot 53.0
25PhosphoserinePhospho.ELM 6.0
1051PhosphothreoninePhospho.ELM 6.0
1052PhosphoserinePhospho.ELM 6.0
1055PhosphoserinePhospho.ELM 6.0
Location(AA) Modification Resource
17O-linkedHMM predict
18Phosphoserine(IKK)HMM predict
21Phosphoserine(ATM)HMM predict
25Phosphoserine(CDC2)HMM predict
71Phosphoserine(IKK)HMM predict
75Phosphoserine(CK1)HMM predict
75Phosphoserine(IKK)HMM predict
89Phosphothreonine(PKC)HMM predict
110Phosphothreonine(CDK)HMM predict
156SulfotyrosineHMM predict
163Phosphotyrosine(INSR)HMM predict
163Phosphotyrosine(Syk)HMM predict
163SulfotyrosineHMM predict
258S-palmitoylHMM predict
261S-palmitoylHMM predict
361Phosphotyrosine(INSR)HMM predict
419Phosphothreonine(PKC)HMM predict
498Phosphoserine(IKK)HMM predict
502Phosphoserine(ATM)HMM predict
756Phosphoserine(ATM)HMM predict
760Phosphoserine(ATM)HMM predict
760Phosphoserine(IKK)HMM predict
801Phosphoserine(PKG)HMM predict
803Phosphoserine(IKK)HMM predict
808Phosphoserine(CK2)HMM predict
845Phosphothreonine(CDK)HMM predict
845Phosphothreonine(MAPK)HMM predict
845Phosphothreonine(CDC2)HMM predict
845Phosphothreonine(PKC)HMM predict
845Phosphothreonine(PKA)HMM predict
854O-linkedHMM predict
855Phosphoserine(IKK)HMM predict
855Phosphoserine(CK1)HMM predict
857Phosphoserine(CK1)HMM predict
885Phosphothreonine(PKC)HMM predict
885Phosphothreonine(PKA)HMM predict
901Phosphotyrosine(INSR)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014577
  • Location:chr22 48552941-48604455
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 48606681 48606798 117 2284
FOXA1 MCF7GSE15244 48613341 48613596 255 9013
H3ac HepG2E 48603953 48606347 2394 695
Myc hESGSE17917 48606450 48606782 332 2161
RARG MCF7GSE15244 48613341 48613637 296 9034
hScc1 BcellGSE12603 48606543 48606798 255 2215
hScc1 BcellGSE12603 48618523 48618734 211 14173
p130 QuiescentGSE19898 48606437 48606620 183 2073
p130 QuiescentGSE19898 48607650 48607987 337 3363
p130 SenescentGSE19898 48606329 48606624 295 2021
p130 SenescentGSE19898 48607680 48607938 258 3354
p130 shRbSenescentGSE19898 48606375 48606662 287 2063
p130 shRbSenescentGSE19898 48607611 48607874 263 3287
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 48540378 48541105 727 12200
hScc1 BcellGSE12603 48534764 48535034 270 18043
hScc1 BcellGSE12603 48547802 48548031 229 5025
hScc1 BcellGSE12603 48550995 48551682 687 1603
p63 keratinocytesGSE17611 48539761 48540617 856 12753
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 48568531 48569906 1375 0
CTCF G2GSE9613 48563821 48564251 430 0
CTCF G2GSE9613 48580549 48580907 358 0
CTCF G2GSE9613 48582635 48583061 426 0
Myc K562GSE19551 48587630 48588214 584 0
hScc1 BcellGSE12603 48555473 48556762 1289 0
hScc1 BcellGSE12603 48557228 48557438 210 0
hScc1 BcellGSE12603 48559285 48559779 494 0
hScc1 BcellGSE12603 48560558 48561098 540 0
hScc1 BcellGSE12603 48561636 48562732 1096 0
hScc1 BcellGSE12603 48565489 48565871 382 0
hScc1 BcellGSE12603 48569156 48569826 670 0
hScc1 BcellGSE12603 48577351 48577519 168 0
hScc1 BcellGSE12603 48580577 48581123 546 0
hScc1 BcellGSE12603 48592361 48592724 363 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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