Annotation Detail for SLC25A30
Basic Information Top
| Gene Symbol: | SLC25A30 ( KMCP1 ) |
|---|---|
| Gene Full Name: | solute carrier family 25, member 30 |
| Band: | 13q14.13 |
| Quick Links | Entrez ID:253512; OMIM: 610793; Uniprot ID:KMCP1_HUMAN; ENSEMBL ID: ENSG00000174032; HGNC ID: 27371 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 81 | Phosphoserine(CAMK2) | HMM predict |
| 125 | N-linked | HMM predict |
| 138 | Phosphoserine(IKK) | HMM predict |
| 274 | Proline | HMM predict |
- RefSeq ID: NM_001010875
- Location:chr13 44868043-44890514
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | MCF7 | GSE19013 | 44890225 | 44890943 | 718 | 70 |
| RARG | MCF7 | GSE15244 | 44908440 | 44908848 | 408 | 18130 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 44866194 | 44866396 | 202 | 1749 |
| CTCF | CD4 | SISSRdata | 44866194 | 44866396 | 202 | 1749 |
| CTCF | Hela | GSE12889 | 44866221 | 44866388 | 167 | 1739 |
| CTCF | G2 | GSE9613 | 44863235 | 44863632 | 397 | 4610 |
| CTCF | G2 | GSE9613 | 44866312 | 44866604 | 292 | 1586 |
| KLF4 | hES | GSE17917 | 44866208 | 44866368 | 160 | 1756 |
| Oct1 | H2O2-Hela | GSE14283 | 44848024 | 44848062 | 38 | 20001 |
| hScc1 | CdLS | GSE12603 | 44866242 | 44866496 | 254 | 1675 |
| hScc1 | G2 | GSE9613 | 44866158 | 44866640 | 482 | 1645 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 44890097 | 44890899 | 802 | 0 |
| Oct1 | Hela | GSE14283 | 44880546 | 44880706 | 160 | 0 |
| Oct1 | Hela | GSE14283 | 44880876 | 44881041 | 165 | 0 |
| P300 | T0-glioblastoma | GSE21026 | 44868034 | 44869409 | 1375 | 0 |
| RARG | MCF7 | GSE15244 | 44886813 | 44887542 | 729 | 0 |
| hScc1 | Bcell | GSE12603 | 44889833 | 44890817 | 984 | 0 |
| hScc1 | G2 | GSE9613 | 44890097 | 44890899 | 802 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-1 | hsa-mir-1-2 | 18 | 15685193 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 15685193 |
| hsa-miR-124 | hsa-mir-124-1 | 8 | 15685193 |
| hsa-miR-124 | hsa-mir-124-2 | 8 | 15685193 |
| hsa-miR-124 | hsa-mir-124-3 | 20 | 15685193 |
| hsa-miR-373 | hsa-mir-373 | 19 | 15685193 |
| hsa-miR-373* | hsa-mir-373 | 19 | 15685193 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 167 | Unknown | MicroArray | miR-1 | SLC25A30 | n_a | 15685193 |
| 254 | Unknown | MicroArray | miR-124 | SLC25A30 | n_a | 15685193 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000174032 | "cardiac and skeletal muscles, cardiogenesis" | n_a | n_a | "lymphocyte, muscle cell" | "benign tumour, malignant tumour, carcinoma, sarcoma" | |
| ENSG00000174032 | G1-to-S transition | n_a | n_a | "lymphocyte, muscle cell" | "benign tumour, malignant tumour, carcinoma, sarcoma" |
| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7155 | HTC | chr13 | 44874256 | 44881409 | 244 | mRNA | SLC25A30 | chr13 | 44868043 | 44890515 | Sense/Antisense (SA) pairs | |