Annotation Detail for MCM9

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Basic Information Top

Gene Symbol:	MCM9 ( C6orf61,FLJ13942,FLJ20170,FLJ56845,MCMDC1,MGC35304,dJ329L24.1,dJ329L24.3 )
Gene Full Name:	minichromosome maintenance complex component 9
Band:	6q22.31
Quick Links	Entrez ID:254394; OMIM: 610098; Uniprot ID:MCM9_HUMAN; ENSEMBL ID: ENSG00000111877; HGNC ID: 21484
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
1088	Phosphoserine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_153255
Location:chr6 119273462-119298001
strand:-

Upstream the gene:1 results
Downstream the gene:0 results
Inside the gene:13 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Oct1	Hela	GSE14283	119308763	119308810	47	10785

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	119297462	119298146	684	0
ER	E2-MCF7	GSE14664	119286427	119286468	41	0
Oct1	H2O2-Hela	GSE14283	119289326	119289354	28	0
Oct1	Hela	GSE14283	119284957	119284988	31	0
Oct1	Hela	GSE14283	119289327	119289354	27	0
PHF8	293T	GSE20725	119297142	119298374	1232	0
PolII	HeLa	GSE12783	119297114	119298469	1355	0
Rb	Quiescent	GSE19898	119297441	119297659	218	0
TFAP2C	MCF7	GSE21234	119297303	119298453	1150	0
hScc1	Bcell	GSE12603	119297210	119298146	936	0
p130	Quiescent	GSE19898	119297415	119297745	330	0
p130	Senescent	GSE19898	119297479	119297846	367	0
p130	shRbSenescent	GSE19898	119297777	119297928	151	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
23108	EST		chr6	119297648	119394405	100	mRNA	MCMDC1	chr6	119273462	119297978	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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