AutismKB 2.0

Annotation Detail for LPCAT4


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Basic Information Top
Gene Symbol:LPCAT4 ( AGPAT7,AYTL3,FLJ10257,LPAAT-eta,LPEAT2 )
Gene Full Name: lysophosphatidylcholine acyltransferase 4
Band: 15q14
Quick LinksEntrez ID:254531; OMIM: 612039; Uniprot ID:LPCT4_HUMAN; ENSEMBL ID: ENSG00000176454; HGNC ID: 30059
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
134HXXXXD motif.
152N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_153613
  • Location:chr15 32438381-32446686
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 32446890 32447457 567 487
CTCF CD4SISSRdata 32446890 32447457 567 487
CTCF HelaGSE12889 32447065 32447302 237 497
CTCF G2GSE9613 32446918 32447395 477 470
H3ac HepG2E 32447534 32448077 543 1119
Myc hESGSE17917 32446823 32447203 380 327
PHF8 293TGSE20725 32446272 32447376 1104 138
PHF8 Hs68minusFBSGSE20725 32446986 32447696 710 655
TAF HelaGSE8489 32447534 32448077 543 1119
TFAP2C MCF7GSE21234 32447064 32447767 703 729
hScc1 BcellGSE12603 32446995 32447606 611 614
hScc1 CdLSGSE12603 32446918 32447497 579 521
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 32441650 32441972 322 0
CTCF G2GSE9613 32444484 32444706 222 0
CTCF G2GSE9613 32446242 32446369 127 0
PHF8 HeLaGSE20725 32445929 32447388 1459 0
TFAP2C MCF7GSE21234 32439698 32440282 584 0
TFAP2C MCF7GSE21234 32445576 32446183 607 0
hScc1 BcellGSE12603 32445936 32446504 568 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018