AutismKB 2.0

Annotation Detail for GABPB1


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:GABPB1 ( BABPB2,E4TF1,E4TF1-47,E4TF1-53,E4TF1B,GABPB,GABPB2,NRF2B1,NRF2B2 )
Gene Full Name: GA binding protein transcription factor, beta subunit 1
Band: 15q21.2
Quick LinksEntrez ID:2553; OMIM: 600610; Uniprot ID:GABP1_HUMAN; ENSEMBL ID: ENSG00000104064; HGNC ID: 4074
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_002041
  • Location:chr15 48365370-48434686
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me3 colorectalcancer 48434903 48435352 449 441
H3ac HepG2E 48434877 48436857 1980 1181
Myc hESGSE17917 48434900 48435170 270 349
Oct1 H2O2-HelaGSE14283 48450968 48451018 50 16307
Oct1 HelaGSE14283 48441867 48441896 29 7195
Oct1 HelaGSE14283 48450968 48451018 50 16307
PHF8 Hs68minusFBSGSE20725 48434059 48435476 1417 81
RUNX JurkatGSE17954 48434836 48434964 128 214
Rb QuiescentGSE19898 48434951 48435479 528 529
TAF HelaGSE8489 48434435 48436857 2422 960
TAF HelaGSE8489 48437191 48437476 285 2647
TAF k562GSE8489 48434877 48436819 1942 1162
hScc1 BcellGSE12603 48434534 48435118 584 140
hScc1 CdLSGSE12603 48438347 48438564 217 3769
p130 SenescentGSE19898 48434248 48435134 886 5
p130 shRbQuiescentGSE19898 48434394 48435244 850 133
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 48433362 48435550 2188 0
H3K4me3 colorectalcancer 48433028 48433974 946 0
H3ac HepG2E 48431189 48431786 597 0
H3ac HepG2E 48432667 48433798 1131 0
PHF8 HeLaGSE20725 48433412 48435410 1998 0
PHF8 Hs68plusFBSGSE20725 48433145 48435555 2410 0
STAT1 HeLaGSE12783 48393539 48394518 979 0
TAF HelaGSE8489 48432842 48433879 1037 0
TFAP2C MCF7GSE21234 48433406 48434024 618 0
hScc1 BcellGSE12603 48433474 48434241 767 0
p130 QuiescentGSE19898 48434370 48434839 469 0
p130 shRbQuiescentGSE19898 48433521 48433875 354 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
8808 mRNA GABPB2 chr15 48434447 48435510 214 mRNA GABPB2 chr15 48365374 48434687Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved