Annotation Detail for GABRA1
Basic Information Top
| Gene Symbol: | GABRA1 ( ECA4,EJM,EJM5 ) |
|---|---|
| Gene Full Name: | gamma-aminobutyric acid (GABA) A receptor, alpha 1 |
| Band: | 5q34 |
| Quick Links | Entrez ID:2554; OMIM: 137160; Uniprot ID:GBRA1_HUMAN; ENSEMBL ID: ENSG00000022355; HGNC ID: 4075 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 38 | N-linked (GlcNAc...) (Potential). | |
| 138 | N-linked (GlcNAc...) (Potential). | |
| 368 | Phosphotyrosine (By similarity). | |
| 375 | Phosphotyrosine (By similarity). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 38 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 138 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 375 | Phosphotyrosine (By similarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 26 | Phosphotyrosine(Abl) | HMM predict |
| 38 | N-linked | HMM predict |
| 66 | Phosphothreonine(PKC) | HMM predict |
| 138 | N-linked | HMM predict |
| 143 | N-linked | HMM predict |
| 161 | Phosphothreonine(PKC) | HMM predict |
| 196 | Phosphotyrosine(SRC) | HMM predict |
| 237 | Phosphotyrosine(SRC) | HMM predict |
| 237 | Phosphotyrosine(INSR) | HMM predict |
| 237 | Phosphotyrosine(Jak) | HMM predict |
| 268 | Phosphoserine(ATM) | HMM predict |
| 292 | O-linked | HMM predict |
| 303 | Phosphoserine(PKG) | HMM predict |
| 365 | N-linked | HMM predict |
| 366 | N-linked | HMM predict |
| 368 | Phosphotyrosine(INSR) | HMM predict |
| 373 | O-linked | HMM predict |
| 376 | Phosphothreonine(CDK) | HMM predict |
| 394 | Phosphothreonine(PKC) | HMM predict |
| 441 | Threonine | HMM predict |
- RefSeq ID: NM_000806
- Location:chr5 161206982-161258989
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| NRSF | Jurkat | GSE13047 | 161206211 | 161206985 | 774 | 385 |
| NRSF | Jurkat | SISSRdata | 161206446 | 161206782 | 336 | 369 |
| NRSF | mAb | Jurkat | 161205369 | 161205763 | 394 | 1417 |
| NRSF-mono | Jurkat | QuESTdata | 161206235 | 161206903 | 668 | 414 |
| NRSF | pAb | Jurkat | 161206163 | 161207718 | 1555 | 42 |
| NRSF-poly | Jurkat | QuESTdata | 161206317 | 161206893 | 576 | 378 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | Jurkat | GSE12889 | 161211387 | 161211537 | 150 | 0 |
| H3K27me3 | colorectal | cancer | 161206466 | 161207860 | 1394 | 0 |
| NRSF | Jurkat | GSE13047 | 161249515 | 161250043 | 528 | 0 |
| NRSF | mAb | Jurkat | 161206023 | 161210436 | 4413 | 0 |
| NRSF | mAb | Jurkat | 161248726 | 161249810 | 1084 | 0 |
| NRSF-mono | Jurkat | QuESTdata | 161249514 | 161249961 | 447 | 0 |
| NRSF-poly | Jurkat | QuESTdata | 161249515 | 161249875 | 360 | 0 |
| Nanog | hES | GSE18292 | 161250438 | 161250900 | 462 | 0 |
| Oct4 | ES | GSE20650 | 161250383 | 161250786 | 403 | 0 |
| Oct4 | hES | GSE17917 | 161207921 | 161208192 | 271 | 0 |
Validated miRNA targets