AutismKB 2.0

Annotation Detail for RASGEF1C


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Basic Information Top
Gene Symbol:RASGEF1C ( FLJ35841 )
Gene Full Name: RasGEF domain family, member 1C
Band: 5q35.3
Quick LinksEntrez ID:255426; OMIM: NA; Uniprot ID:RGF1C_HUMAN; ENSEMBL ID: ENSG00000146090; HGNC ID: 27400
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_175062
  • Location:chr5 179460401-179568735
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 179568736 179568946 210 106
CTCF CD4SISSRdata 179568736 179568946 210 106
CTCF JurkatGSE12889 179568740 179568933 193 101
CTCF G2GSE9613 179568229 179569324 1095 41
CTCF G2GSE9613 179571793 179572232 439 3277
CTCF G2GSE9613 179572496 179572868 372 3947
CTCF G2GSE9613 179573879 179574140 261 5274
CTCF G2GSE9613 179575558 179576223 665 7155
Fos K562GSE19551 179569715 179570263 548 1254
hScc1 BcellGSE12603 179568766 179569393 627 344
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 179496721 179497324 603 0
CTCF G2GSE9613 179498880 179500587 1707 0
CTCF G2GSE9613 179502578 179504003 1425 0
CTCF G2GSE9613 179514547 179515190 643 0
CTCF G2GSE9613 179521025 179522048 1023 0
CTCF G2GSE9613 179529185 179529432 247 0
CTCF G2GSE9613 179530424 179530645 221 0
CTCF G2GSE9613 179531778 179532560 782 0
CTCF G2GSE9613 179535695 179536136 441 0
CTCF G2GSE9613 179538622 179539189 567 0
CTCF G2GSE9613 179554188 179554799 611 0
CTCF G2GSE9613 179556657 179557107 450 0
CTCF G2GSE9613 179557652 179557999 347 0
CTCF G2GSE9613 179558371 179558774 403 0
CTCF G2GSE9613 179567196 179567961 765 0
Fos K562GSE19551 179496198 179496650 452 0
Rb QuiescentGSE19898 179538977 179539107 130 0
TFAP2C MCF7GSE21234 179519280 179519979 699 0
TFAP2C MCF7GSE21234 179531853 179532895 1042 0
TFAP2C MCF7GSE21234 179540561 179541014 453 0
hScc1 BcellGSE12603 179499473 179500587 1114 0
p130 SenescentGSE19898 179536985 179537268 283 0
p130 shRbSenescentGSE19898 179533614 179533774 160 0
p130 shRbSenescentGSE19898 179568033 179568269 236 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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