Annotation Detail for GABRG2
Basic Information Top
| Gene Symbol: | GABRG2 ( CAE2,ECA2,GEFSP3 ) |
|---|---|
| Gene Full Name: | gamma-aminobutyric acid (GABA) A receptor, gamma 2 |
| Band: | 5q34 |
| Quick Links | Entrez ID:2566; OMIM: 137164; Uniprot ID:GBRG2_HUMAN; ENSEMBL ID: ENSG00000113327; HGNC ID: 4087 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 52 | N-linked (GlcNAc...) (Potential). | |
| 129 | N-linked (GlcNAc...) (Potential). | |
| 247 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 52 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 129 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 247 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 366 | Phosphoserine (PKC |
| Location(AA) | Modification | Resource |
|---|---|---|
| 11 | O-linked | HMM predict |
| 14 | Phosphotyrosine(Abl) | HMM predict |
| 16 | O-linked | HMM predict |
| 20 | O-linked | HMM predict |
| 42 | Phosphoserine(CK2) | HMM predict |
| 46 | Phosphotyrosine(INSR) | HMM predict |
| 46 | Phosphotyrosine(Syk) | HMM predict |
| 46 | Sulfotyrosine | HMM predict |
| 49 | Phosphotyrosine(Syk) | HMM predict |
| 52 | N-linked | HMM predict |
| 129 | N-linked | HMM predict |
| 165 | Phosphothreonine(CDK) | HMM predict |
| 165 | Phosphothreonine(CDC2) | HMM predict |
| 209 | Phosphoserine(CK1) | HMM predict |
| 220 | Phosphotyrosine(SRC) | HMM predict |
| 247 | N-linked | HMM predict |
| 259 | Phosphotyrosine(INSR) | HMM predict |
| 259 | Phosphotyrosine(Jak) | HMM predict |
| 314 | O-linked | HMM predict |
| 325 | Phosphoserine(PKG) | HMM predict |
| 366 | Phosphoserine(PKC) | HMM predict |
| 393 | N-linked | HMM predict |
| 404 | Sulfotyrosine | HMM predict |
| 406 | Phosphotyrosine(INSR) | HMM predict |
- RefSeq ID: NM_000816
- Location:chr5 161427294-161513628
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| NRSF | mAb | Jurkat | 161424607 | 161425149 | 542 | 2417 |
| Nanog | ES | GSE20650 | 161412260 | 161412703 | 443 | 14813 |
| Nanog | hES | GSE18292 | 161412140 | 161412585 | 445 | 14932 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| GABP | k562 | GSE8489 | 161451189 | 161451365 | 176 | 0 |
| NRSF | Jurkat | GSE13047 | 161427721 | 161428676 | 955 | 0 |
| NRSF | Jurkat | SISSRdata | 161427994 | 161428497 | 503 | 0 |
| NRSF | mAb | Jurkat | 161425524 | 161429530 | 4006 | 0 |
| NRSF | mAb | Jurkat | 161429870 | 161430266 | 396 | 0 |
| NRSF-mono | Jurkat | QuESTdata | 161427903 | 161428641 | 738 | 0 |
| NRSF-poly | Jurkat | QuESTdata | 161427825 | 161428526 | 701 | 0 |
| Nanog | ES | GSE20650 | 161474410 | 161474872 | 462 | 0 |
| Nanog | hES | GSE18292 | 161457312 | 161457563 | 251 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21780 | mRNA | GABRG2 | chr5 | 161427294 | 161513629 | 7077 | EST | chr5 | 161498324 | 161505401 | Non-exonic Bidirectional (NOB) pairs | |