AutismKB 2.0

Annotation Detail for SERINC5


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Basic Information Top
Gene Symbol:SERINC5 ( C5orf12,TPO1 )
Gene Full Name: serine incorporator 5
Band: 5q14.1
Quick LinksEntrez ID:256987; OMIM: NA; Uniprot ID:SERC5_HUMAN; ENSEMBL ID: ENSG00000164300; HGNC ID: 18825
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
113N-linked (GlcNAc...) (Potential).
183N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_178276
  • Location:chr5 79442805-79587625
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 79607068 79607267 199 19542
CTCF CD4SISSRdata 79607068 79607267 199 19542
CTCF JurkatGSE12889 79606996 79607240 244 19493
CTCF G2GSE9613 79592154 79592445 291 4674
Fos K562GSE19551 79588763 79589533 770 1523
Fos K562GSE19551 79602177 79602417 240 14672
H3ac HepG2E 79588002 79588384 382 568
H3ac HepG2E 79588908 79589443 535 1550
Nanog hESGSE18292 79598929 79599190 261 11434
Nanog hESGSE18292 79607055 79607333 278 19569
PHF8 293TGSE20725 79587256 79588413 1157 209
PHF8 HeLaGSE20725 79586996 79588436 1440 91
PHF8 Hs68minusFBSGSE20725 79587377 79588297 920 212
Rb shRbSenescenceGSE19898 79597463 79597595 132 9904
Sox2 hESGSE18292 79589559 79589897 338 2103
TAF HelaGSE8489 79587970 79588384 414 552
TAF HelaGSE8489 79588908 79589152 244 1405
TAF k562GSE8489 79588002 79588384 382 568
TAF k562GSE8489 79588908 79589266 358 1462
TFAP2C MCF7GSE21234 79588972 79589497 525 1609
hScc1 BcellGSE12603 79587292 79588040 748 41
hScc1 BcellGSE12603 79606939 79607119 180 19404
hScc1 CdLSGSE12603 79587213 79588101 888 32
hScc1 CdLSGSE12603 79606939 79607119 180 19404
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 79434104 79434449 345 8529
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 79536760 79536883 123 0
CTCF CD4GSE12889 79569767 79569974 207 0
CTCF CD4SISSRdata 79536760 79536883 123 0
CTCF CD4SISSRdata 79569767 79569974 207 0
CTCF G2GSE9613 79472885 79473222 337 0
CTCF G2GSE9613 79478973 79479125 152 0
CTCF G2GSE9613 79514556 79514922 366 0
CTCF G2GSE9613 79527698 79527857 159 0
CTCF G2GSE9613 79552363 79552798 435 0
CTCF G2GSE9613 79587044 79588071 1027 0
FOXA1 MCF7GSE15244 79515490 79516434 944 0
FOXA1 MCF7GSE15244 79560951 79561681 730 0
FOXA1 MCF7GSE15244 79578428 79579281 853 0
Fos K562GSE19551 79578713 79579400 687 0
FoxA1 MCF7MACSdata 79536492 79536858 366 0
Gata2 K562GSE18868 79536286 79536998 712 0
H3K4me2 HCT116GSE10453 79585812 79586769 957 0
H3K4me3 colorectalcancer 79585812 79586946 1134 0
H3ac HepG2E 79584160 79585466 1306 0
H3ac HepG2E 79585924 79586946 1022 0
NRSF mAbJurkat 79536923 79537212 289 0
NRSF mAbJurkat 79542320 79542751 431 0
NRSF pAbJurkat 79583338 79583584 246 0
Nanog ESGSE20650 79442899 79443367 468 0
Nanog hESGSE18292 79577621 79578080 459 0
Oct1 H2O2-HelaGSE14283 79481929 79481957 28 0
Oct1 H2O2-HelaGSE14283 79565275 79565307 32 0
Oct1 HelaGSE14283 79467132 79467174 42 0
Oct1 HelaGSE14283 79565276 79565305 29 0
Oct1 HelaGSE14283 79565633 79565669 36 0
Oct1 HelaGSE14283 79573441 79573469 28 0
PHF8 Hs68plusFBSGSE20725 79586653 79588404 1751 0
RARA MCF7GSE15244 79506652 79506982 330 0
RARA MCF7GSE15244 79578362 79579281 919 0
Rb shRbSenescenceGSE19898 79586621 79586851 230 0
Stat6 IL-4-hr1GSE17850 79517999 79518615 616 0
Stat6 IL-4-hr1GSE17850 79557151 79557637 486 0
TAF HelaGSE8489 79583935 79584936 1001 0
TFAP2C MCF7GSE21234 79459727 79460006 279 0
TFAP2C MCF7GSE21234 79512570 79513731 1161 0
USF1 HepG2E 79523842 79525646 1804 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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