AutismKB 2.0

Annotation Detail for FRMD3


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Basic Information Top
Gene Symbol:FRMD3 ( 4.1O,EPB41L4O,EPB41LO,MGC20553,P410 )
Gene Full Name: FERM domain containing 3
Band: 9q21.32
Quick LinksEntrez ID:257019; OMIM: 607619; Uniprot ID:FRMD3_HUMAN; ENSEMBL ID: ENSG00000172159; HGNC ID: 24125
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
415Phosphoserine (By similarity).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_174938
  • Location:chr9 85052126-85343167
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 85349246 85349391 145 6151
CTCF CD4SISSRdata 85349246 85349391 145 6151
Sox2 hESGSE18292 85349204 85349489 285 6179
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Nanog ESGSE20650 85040288 85040636 348 11665
TFAP2C MCF7GSE21234 85043952 85044243 291 8029
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 85330733 85330811 78 0
FOXA1 MCF7GSE15244 85236535 85237388 853 0
Fos K562GSE19551 85200987 85201535 548 0
NRSF JurkatGSE13047 85100819 85101404 585 0
NRSF JurkatGSE13047 85159588 85160182 594 0
NRSF JurkatSISSRdata 85100925 85101202 277 0
NRSF JurkatSISSRdata 85159664 85160046 382 0
NRSF mAbJurkat 85099144 85101201 2057 0
NRSF mAbJurkat 85159407 85160981 1574 0
NRSF-mono JurkatQuESTdata 85100835 85101397 562 0
NRSF-mono JurkatQuESTdata 85159663 85160048 385 0
NRSF-poly JurkatQuESTdata 85100874 85101376 502 0
NRSF-poly JurkatQuESTdata 85159598 85160251 653 0
Nanog hESGSE18292 85087566 85088027 461 0
Nanog hESGSE18292 85237210 85237518 308 0
Nanog hESGSE18292 85340548 85340808 260 0
Oct1 H2O2-HelaGSE14283 85110075 85110105 30 0
Oct1 H2O2-HelaGSE14283 85201254 85201286 32 0
Oct1 HelaGSE14283 85181115 85181186 71 0
Oct1 HelaGSE14283 85194777 85194813 36 0
Oct1 HelaGSE14283 85195491 85195520 29 0
Oct1 HelaGSE14283 85201255 85201295 40 0
Oct1 HelaGSE14283 85260181 85260255 74 0
Oct1 HelaGSE14283 85330738 85330823 85 0
Oct4 hESGSE21916 85236932 85237384 452 0
RARA MCF7GSE15244 85236341 85237463 1122 0
STAT1 HeLaGSE12783 85276098 85278058 1960 0
Sox2 hESGSE18292 85340549 85340745 196 0
Stat6 IL-4-hr4GSE17850 85100971 85101811 840 0
TFAP2C MCF7GSE21234 85236419 85237455 1036 0
TFAP2C MCF7GSE21234 85256030 85256521 491 0
hScc1 BcellGSE12603 85138313 85139470 1157 0
hScc1 BcellGSE12603 85342728 85343551 823 0
hScc1 CdLSGSE12603 85138745 85139470 725 0
hScc1 G2GSE9613 85138745 85139754 1009 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
26642 mRNA chr9 83111643 83115300 113 mRNA FRMD3 chr9 83087458 83111756Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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