AutismKB 2.0

Annotation Detail for SHPRH


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:SHPRH ( FLJ27258,FLJ37625,FLJ45012,FLJ90837,KIAA2023,MGC134886,bA545I5.2 )
Gene Full Name: SNF2 histone linker PHD RING helicase
Band: 6q24.3
Quick LinksEntrez ID:257218; OMIM: 608048; Uniprot ID:SHPRH_HUMAN; ENSEMBL ID: ENSG00000146414; HGNC ID: 19336
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
822DEAQ box.
Location(AA) Modifications Resource
Location(AA) Modification Resource
93Phosphoserine(CDC2)HMM predict
132N-linkedHMM predict
139Phosphothreonine(PKC)HMM predict
169Phosphoserine(IKK)HMM predict
347Phosphotyrosine(INSR)HMM predict
530Phosphoserine(CDC2)HMM predict
546Phosphothreonine(CK2)HMM predict
550Phosphotyrosine(Jak)HMM predict
556Phosphoserine(CK2)HMM predict
564SulfotyrosineHMM predict
604O-linkedHMM predict
648O-linkedHMM predict
653N-linkedHMM predict
680S-palmitoylHMM predict
714O-linkedHMM predict
718Phosphothreonine(PKA)HMM predict
722Phosphoserine(CDC2)HMM predict
722Phosphoserine(ATM)HMM predict
725Phosphoserine(IKK)HMM predict
741Phosphoserine(CK1)HMM predict
927Phosphoserine(CDC2)HMM predict
968Phosphothreonine(PKA)HMM predict
982S-palmitoylHMM predict
1053Phosphoserine(CK1)HMM predict
1053PhosphoserineHMM predict
1178Phosphoserine(PKG)HMM predict
1253SulfotyrosineHMM predict
1286Phosphothreonine(PKC)HMM predict
1448S-palmitoylHMM predict
1518Phosphothreonine(PKC)HMM predict
1567N-linkedHMM predict
1655N-linkedHMM predict
1661O-linkedHMM predict
1661Phosphoserine(IKK)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_173082
  • Location:chr6 146247636-146326925
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 146326579 146327401 822 65
ER E2-MCF7GSE14664 146331674 146331714 40 4769
ER E2-MCF7GSE14664 146336006 146336075 69 9115
ETS1 JurkatGSE17954 146326333 146327524 1191 3
H3ac HepG2E 146327729 146327947 218 913
P300 T30-glioblastomaGSE21026 146326909 146327548 639 303
PHF8 293TGSE20725 146326285 146327891 1606 163
PHF8 HeLaGSE20725 146326315 146327862 1547 163
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
P300 T0-glioblastomaGSE21026 146244794 146245565 771 2457
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 146250943 146251125 182 0
CTCF CD4SISSRdata 146250943 146251125 182 0
CTCF G2GSE9613 146251004 146251375 371 0
ER Fulvestrant-MCF7GSE14664 146315779 146315813 34 0
H3K4me3 colorectalcancer 146325577 146326621 1044 0
H3ac HepG2E 146325682 146326930 1248 0
Myc K562GSE19551 146256523 146256773 250 0
Oct1 HelaGSE14283 146303916 146303947 31 0
Oct1 HelaGSE14283 146314653 146314698 45 0
TAF k562GSE8489 146325682 146326551 869 0
hScc1 CdLSGSE12603 146250611 146251264 653 0
hScc1 G2GSE9613 146250962 146251375 413 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
23286 mRNA chr6 146097700 146249414 1625 mRNA SHPRH chr6 146247644 146326926Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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