Annotation Detail for CCDC96
Basic Information Top
| Gene Symbol: | CCDC96 ( FLJ90575,MGC138479 ) |
|---|---|
| Gene Full Name: | coiled-coil domain containing 96 |
| Band: | 4p16.1 |
| Quick Links | Entrez ID:257236; OMIM: NA; Uniprot ID:CCD96_HUMAN; ENSEMBL ID: ENSG00000173013; HGNC ID: 26900 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 26 | Phosphoserine(PKA) | HMM predict |
| 31 | O-linked | HMM predict |
| 37 | Phosphoserine(MAPK) | HMM predict |
| 37 | O-linked | HMM predict |
| 37 | Phosphoserine(ATM) | HMM predict |
| 45 | Phosphoserine(CK2) | HMM predict |
| 57 | Phosphoserine(ATM) | HMM predict |
| 57 | Phosphoserine(IKK) | HMM predict |
| 61 | O-linked | HMM predict |
| 194 | Phosphoserine(ATM) | HMM predict |
| 240 | N-linked | HMM predict |
| 246 | N-linked | HMM predict |
| 284 | Phosphotyrosine(EGFR) | HMM predict |
| 321 | Phosphothreonine(PKC) | HMM predict |
| 415 | N-linked | HMM predict |
| 419 | N-linked | HMM predict |
| 527 | Phosphoserine(PKA) | HMM predict |
| 536 | Phosphothreonine(PKC) | HMM predict |
- RefSeq ID: NM_153376
- Location:chr4 7093479-7095628
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 7096193 | 7096959 | 766 | 948 |
| CTCF | G2 | GSE9613 | 7098351 | 7098804 | 453 | 2949 |
| CTCF | G2 | GSE9613 | 7099430 | 7100675 | 1245 | 4424 |
| CTCF | G2 | GSE9613 | 7102423 | 7104190 | 1767 | 7678 |
| Fos | K562 | GSE19551 | 7095405 | 7096064 | 659 | 106 |
| H3K4me3 | colorectal | cancer | 7097091 | 7097909 | 818 | 1872 |
| TFAP2C | MCF7 | GSE21234 | 7102149 | 7102614 | 465 | 6753 |
| hScc1 | Bcell | GSE12603 | 7099738 | 7100152 | 414 | 4317 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 7090104 | 7090327 | 223 | 3264 |
| CTCF | CD4 | SISSRdata | 7090104 | 7090327 | 223 | 3264 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 7094481 | 7095841 | 1360 | 0 |
| Rb | Quiescent | GSE19898 | 7095453 | 7095746 | 293 | 0 |
| hScc1 | Bcell | GSE12603 | 7094556 | 7095768 | 1212 | 0 |
| hScc1 | G2 | GSE9613 | 7095113 | 7095841 | 728 | 0 |
| p130 | shRbSenescent | GSE19898 | 7095279 | 7095875 | 596 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19384 | mRNA | MGC21874 | chr4 | 7161697 | 7177747 | 188 | mRNA | FLJ90575 | chr4 | 7160969 | 7162738 | Sense/Antisense (SA) pairs |