Annotation Detail for SNX33

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Basic Information Top

Gene Symbol:	SNX33 ( MGC32065,SH3PX3,SH3PXD3C,SNX30 )
Gene Full Name:	sorting nexin 33
Band:	15q24.2
Quick Links	Entrez ID:257364; OMIM: NA; Uniprot ID:SNX33_HUMAN; ENSEMBL ID: ENSG00000173548; HGNC ID: 28468
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
70	Phosphotyrosine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_153271
Location:chr15 73728402-73738020
strand:+

Upstream the gene:5 results
Downstream the gene:7 results
Inside the gene:4 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	73726682	73727861	1179	1131
H3ac	HepG2	E	73724526	73724752	226	3764
H3ac	HepG2	E	73725589	73726533	944	2342
TAF	Hela	GSE8489	73725306	73725507	201	2996
hScc1	Bcell	GSE12603	73726642	73727488	846	1338

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
KLF4	hES	GSE17917	73738589	73738800	211	674
RARA	MCF7	GSE15244	73743002	73744146	1144	5554
Rb	Quiescent	GSE19898	73740524	73740748	224	2616
Rb	Senescent	GSE19898	73740485	73740784	299	2614
Rb	shRbSenescence	GSE19898	73740592	73740743	151	2647
TFAP2C	MCF7	GSE21234	73742926	73744188	1262	5537
p130	Senescent	GSE19898	73740311	73740990	679	2630

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Fos	K562	GSE19551	73730602	73731275	673	0
H3ac	HepG2	E	73727456	73730918	3462	0
TFAP2C	MCF7	GSE21234	73730690	73731397	707	0
hScc1	Bcell	GSE12603	73729104	73729467	363	0

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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