AutismKB 2.0

Annotation Detail for TBC1D22A


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Basic Information Top
Gene Symbol:TBC1D22A ( C22orf4,HSC79E021 )
Gene Full Name: TBC1 domain family, member 22A
Band: 22q13.31
Quick LinksEntrez ID:25771; OMIM: NA; Uniprot ID:TB22A_HUMAN; ENSEMBL ID: ENSG00000054611; HGNC ID: 1309
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
165Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
16Phosphoserine(PKG)HMM predict
50O-linkedHMM predict
59Phosphoserine(PKA)HMM predict
67N-linkedHMM predict
104N-linkedHMM predict
106Phosphoserine(ATM)HMM predict
132Phosphoserine(MAPK)HMM predict
132Phosphoserine(ATM)HMM predict
132O-linkedHMM predict
147Phosphoserine(IKK)HMM predict
149O-linkedHMM predict
150O-linkedHMM predict
150Phosphoserine(PKB)HMM predict
165Phosphoserine(IKK)HMM predict
167Phosphoserine(IKK)HMM predict
167Phosphoserine(CK1)HMM predict
167Phosphoserine(PKA)HMM predict
175O-linkedHMM predict
183O-linkedHMM predict
191Phosphoserine(CK1)HMM predict
219Phosphoserine(PKA)HMM predict
219Phosphoserine(CAMK2)HMM predict
249Phosphothreonine(PKC)HMM predict
318Phosphotyrosine(Jak)HMM predict
364Phosphotyrosine(INSR)HMM predict
377N-linkedHMM predict
455Phosphotyrosine(INSR)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_014346
  • Location:chr22 45537212-45948385
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 45527608 45529801 2193 8508
CTCF CD4GSE12889 45533336 45533615 279 3737
CTCF CD4SISSRdata 45533336 45533615 279 3737
CTCF JurkatGSE12889 45533369 45533694 325 3681
CTCF G2GSE9613 45533710 45533912 202 3402
H3ac HepG2E 45535325 45536109 784 1496
H3ac HepG2E 45536644 45537074 430 354
Myc K562GSE19551 45536483 45537805 1322 69
P300 T30-glioblastomaGSE21026 45527654 45529811 2157 8480
P300 T30-glioblastomaGSE21026 45535737 45538312 2575 188
PHF8 Hs68plusFBSGSE20725 45536500 45537817 1317 54
PolII HeLaGSE12783 45535554 45538220 2666 326
USF1 HepG2E 45528675 45529921 1246 7915
USF2 HepG2E 45528745 45529444 699 8118
hScc1 BcellGSE12603 45536644 45537148 504 317
hScc1 CdLSGSE12603 45533710 45533912 202 3402
p130 SenescentGSE19898 45528631 45529463 832 8166
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 45963737 45964205 468 15586
hScc1 BcellGSE12603 45948532 45948840 308 301
hScc1 BcellGSE12603 45967008 45967520 512 18879
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 45903957 45906372 2415 0
CBP JurkatGSE17954 45930790 45933334 2544 0
CBP T30-glioblastomaGSE21026 45536421 45538249 1828 0
CBP T30-glioblastomaGSE21026 45548168 45549236 1068 0
CTCF CD4GSE12889 45577970 45578312 342 0
CTCF CD4SISSRdata 45577970 45578312 342 0
CTCF G2GSE9613 45551668 45552322 654 0
CTCF G2GSE9613 45573110 45573641 531 0
CTCF G2GSE9613 45577461 45578434 973 0
CTCF G2GSE9613 45910229 45910477 248 0
CTCF G2GSE9613 45927732 45928049 317 0
CTCF G2GSE9613 45943632 45944163 531 0
ER MCF7GSE19013 45672187 45672394 207 0
ETS1 JurkatGSE17954 45536529 45537903 1374 0
FOXA1 MCF7GSE15244 45575834 45576439 605 0
FOXA1 MCF7GSE15244 45603895 45604864 969 0
FOXA1 MCF7GSE15244 45876576 45877730 1154 0
Fos K562GSE19551 45548378 45548814 436 0
Fos K562GSE19551 45590917 45591507 590 0
Fos K562GSE19551 45708995 45709906 911 0
Fos K562GSE19551 45881883 45882401 518 0
Fos K562GSE19551 45904151 45904587 436 0
FoxA1 MCF7MACSdata 45877228 45877608 380 0
H3ac HepG2E 45537386 45538149 763 0
H3ac HepG2E 45538677 45539120 443 0
H3ac HepG2E 45548872 45552042 3170 0
H3ac HepG2E 45708898 45709359 461 0
H3ac HepG2E 45709752 45710637 885 0
Jun K562GSE19551 45881982 45882407 425 0
KLF4 hESGSE17917 45835563 45835717 154 0
KLF4 hESGSE17917 45851912 45852186 274 0
KLF4 hESGSE17917 45902480 45902750 270 0
LIN54 SGSE7516 45537249 45537882 633 0
Myc K562GSE19551 45573180 45573535 355 0
Myc K562GSE19551 45591018 45591345 327 0
Myc K562GSE19551 45670287 45670799 512 0
Myc K562GSE19551 45904245 45904580 335 0
NFkBII GM12878GSE19485 45548010 45549774 1764 0
NRSF JurkatGSE13047 45562999 45563280 281 0
NRSF JurkatSISSRdata 45563090 45563280 190 0
NRSF-mono JurkatQuESTdata 45562998 45563294 296 0
Nanog ESGSE20650 45858765 45859215 450 0
Nanog hESGSE18292 45733287 45733628 341 0
Nanog hESGSE18292 45877335 45877667 332 0
P300 T30-glioblastomaGSE21026 45548052 45549441 1389 0
P300 T30-glioblastomaGSE21026 45709032 45710108 1076 0
PHF8 293TGSE20725 45536520 45537965 1445 0
PHF8 HeLaGSE20725 45536575 45537936 1361 0
RARA MCF7GSE15244 45877168 45877650 482 0
Rb SenescentGSE19898 45929105 45929328 223 0
Stat6 IL-4-hr4GSE17850 45946021 45946542 521 0
TFAP2C MCF7GSE21234 45548403 45548983 580 0
TFAP2C MCF7GSE21234 45622397 45622765 368 0
TFAP2C MCF7GSE21234 45768056 45768774 718 0
TFAP2C MCF7GSE21234 45847057 45847491 434 0
TFAP2C MCF7GSE21234 45876467 45876971 504 0
TFAP2C MCF7GSE21234 45877181 45877886 705 0
TFAP2C MCF7GSE21234 45889658 45890043 385 0
TFAP2C MCF7GSE21234 45914841 45915221 380 0
TFAP2C MCF7GSE21234 45943860 45944146 286 0
USF1 HepG2E 45590990 45591358 368 0
USF1 HepG2E 45638860 45639139 279 0
USF2 HepG2E 45709790 45710908 1118 0
hScc1 BcellGSE12603 45547613 45547956 343 0
hScc1 BcellGSE12603 45577874 45578398 524 0
hScc1 BcellGSE12603 45720181 45720467 286 0
hScc1 BcellGSE12603 45765312 45765583 271 0
hScc1 BcellGSE12603 45795737 45796084 347 0
hScc1 BcellGSE12603 45804079 45804392 313 0
hScc1 BcellGSE12603 45811593 45811877 284 0
hScc1 BcellGSE12603 45815953 45816860 907 0
hScc1 BcellGSE12603 45821054 45821388 334 0
hScc1 BcellGSE12603 45832427 45833249 822 0
hScc1 BcellGSE12603 45838672 45838895 223 0
hScc1 BcellGSE12603 45911203 45911825 622 0
hScc1 BcellGSE12603 45915640 45915763 123 0
hScc1 BcellGSE12603 45942867 45943375 508 0
hScc1 BcellGSE12603 45946033 45946539 506 0
hScc1 CdLSGSE12603 45573110 45573604 494 0
hScc1 CdLSGSE12603 45577802 45578398 596 0
hScc1 G2GSE9613 45573006 45573562 556 0
p63 keratinocytesGSE17611 45616950 45617866 916 0
p63 keratinocytesGSE17611 45904035 45904831 796 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
17619 mRNA TBC1D22A chr22 45479067 45890241 1950 mRNA chr22 45630485 45632435 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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