Annotation Detail for SAMM50
Basic Information Top
| Gene Symbol: | SAMM50 ( FLJ35825,FLJ42905,FLJ99036,OMP85,SAM50,TOB55,TRG-3,YNL026W ) |
|---|---|
| Gene Full Name: | sorting and assembly machinery component 50 homolog (S. cerevisiae) |
| Band: | 22q13.31 |
| Quick Links | Entrez ID:25813; OMIM: 612058; Uniprot ID:SAM50_HUMAN; ENSEMBL ID: ENSG00000100347; HGNC ID: 24276 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 243 | Phosphoserine(PKA) | HMM predict |
| 243 | Phosphoserine(PKB) | HMM predict |
| 253 | Phosphoserine(IKK) | HMM predict |
| 268 | N-linked | HMM predict |
| 288 | Phosphotyrosine(INSR) | HMM predict |
| 361 | Phosphotyrosine(INSR) | HMM predict |
| 361 | Phosphotyrosine(Jak) | HMM predict |
| 468 | Phenylalanine | HMM predict |
| 469 | Phenylalanine | HMM predict |
- RefSeq ID: NM_015380
- Location:chr22 42682633-42723743
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| KLF4 | hES | GSE17917 | 42679555 | 42679821 | 266 | 2946 |
| PHF8 | Hs68minusFBS | GSE20725 | 42681960 | 42683195 | 1235 | 56 |
| Rb | Senescent | GSE19898 | 42682178 | 42682974 | 796 | 58 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 42720374 | 42720701 | 327 | 0 |
| CTCF | CD4 | SISSRdata | 42720374 | 42720701 | 327 | 0 |
| CTCF | Hela | GSE12889 | 42720339 | 42720618 | 279 | 0 |
| CTCF | G2 | GSE9613 | 42720268 | 42721385 | 1117 | 0 |
| ER | Breast-Cancer | GSE22609 | 42697251 | 42697980 | 729 | 0 |
| ETS1 | Jurkat | GSE17954 | 42681952 | 42683429 | 1477 | 0 |
| FOXA1 | MCF7 | GSE15244 | 42684179 | 42684566 | 387 | 0 |
| Fos | K562 | GSE19551 | 42712646 | 42713111 | 465 | 0 |
| Gata1 | K562 | GSE18868 | 42696706 | 42697243 | 537 | 0 |
| Gata2 | K562 | GSE18868 | 42696542 | 42697267 | 725 | 0 |
| Myc | K562 | GSE19551 | 42712682 | 42713190 | 508 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 42682032 | 42683567 | 1535 | 0 |
| PHF8 | 293T | GSE20725 | 42681875 | 42683395 | 1520 | 0 |
| PHF8 | HeLa | GSE20725 | 42681853 | 42683426 | 1573 | 0 |
| TAF | k562 | GSE8489 | 42684179 | 42684497 | 318 | 0 |
| hScc1 | Bcell | GSE12603 | 42719643 | 42720836 | 1193 | 0 |
| hScc1 | Bcell | GSE12603 | 42723294 | 42723837 | 543 | 0 |
| hScc1 | CdLS | GSE12603 | 42720374 | 42721124 | 750 | 0 |
Validated miRNA targets