Annotation Detail for ATXN10
Basic Information Top
| Gene Symbol: | ATXN10 ( E46L,FLJ37990,HUMEEP,SCA10 ) |
|---|---|
| Gene Full Name: | ataxin 10 |
| Band: | 22q13.31 |
| Quick Links | Entrez ID:25814; OMIM: 611150; Uniprot ID:ATX10_HUMAN; ENSEMBL ID: ENSG00000130638; HGNC ID: 10549 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 12 | O-linked | HMM predict |
| 151 | Phosphoserine(CK1) | HMM predict |
| 406 | N-linked | HMM predict |
| 411 | N-linked | HMM predict |
| 424 | N-linked | HMM predict |
| 429 | N-linked | HMM predict |
| 430 | Phosphoserine(ATM) | HMM predict |
- RefSeq ID: NM_013236
- Location:chr22 44446350-44619492
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3ac | HepG2 | E | 44445326 | 44446143 | 817 | 616 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 44638192 | 44638835 | 643 | 19021 |
| NRSF | Jurkat | GSE13047 | 44621393 | 44622015 | 622 | 2212 |
| NRSF | mAb | Jurkat | 44620849 | 44621109 | 260 | 1487 |
| NRSF | mAb | Jurkat | 44621421 | 44622166 | 745 | 2301 |
| NRSF | mAb | Jurkat | 44623114 | 44625187 | 2073 | 4658 |
| NRSF | mAb | Jurkat | 44625723 | 44626400 | 677 | 6569 |
| NRSF-mono | Jurkat | QuESTdata | 44621392 | 44622015 | 623 | 2211 |
| NRSF-poly | Jurkat | QuESTdata | 44621411 | 44621970 | 559 | 2198 |
| Nanog | ES | GSE20650 | 44619591 | 44620214 | 623 | 410 |
| TFAP2C | MCF7 | GSE21234 | 44633930 | 44634246 | 316 | 14596 |
| hScc1 | Bcell | GSE12603 | 44633760 | 44634363 | 603 | 14569 |
| hScc1 | Bcell | GSE12603 | 44634846 | 44635124 | 278 | 15493 |
| hScc1 | CdLS | GSE12603 | 44638192 | 44638835 | 643 | 19021 |
| hScc1 | G2 | GSE9613 | 44638192 | 44638870 | 678 | 19039 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T0-glioblastoma | GSE21026 | 44527487 | 44528165 | 678 | 0 |
| CTCF | G2 | GSE9613 | 44446288 | 44447243 | 955 | 0 |
| FOXA1 | MCF7 | GSE15244 | 44455791 | 44456370 | 579 | 0 |
| FOXA1 | MCF7 | GSE15244 | 44517207 | 44518212 | 1005 | 0 |
| FoxA1 | MCF7 | MACSdata | 44463570 | 44463758 | 188 | 0 |
| FoxA1 | MCF7 | MACSdata | 44517543 | 44517769 | 226 | 0 |
| FoxA1 | MCF7 | MACSdata | 44533195 | 44533347 | 152 | 0 |
| FoxA1 | MCF7 | MACSdata | 44560083 | 44560360 | 277 | 0 |
| H3ac | HepG2 | E | 44447712 | 44449352 | 1640 | 0 |
| KLF4 | hES | GSE17917 | 44446660 | 44447062 | 402 | 0 |
| NRSF | mAb | Jurkat | 44618542 | 44620278 | 1736 | 0 |
| P300 | T0-glioblastoma | GSE21026 | 44517050 | 44518623 | 1573 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 44462811 | 44464217 | 1406 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 44517125 | 44518041 | 916 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 44579281 | 44580192 | 911 | 0 |
| PHF8 | HeLa | GSE20725 | 44445797 | 44447405 | 1608 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 44445976 | 44447476 | 1500 | 0 |
| RARA | MCF7 | GSE15244 | 44455576 | 44456300 | 724 | 0 |
| RARA | MCF7 | GSE15244 | 44463145 | 44463874 | 729 | 0 |
| RARA | MCF7 | GSE15244 | 44517207 | 44518212 | 1005 | 0 |
| RARG | MCF7 | GSE15244 | 44455680 | 44456370 | 690 | 0 |
| RARG | MCF7 | GSE15244 | 44461382 | 44461528 | 146 | 0 |
| RARG | MCF7 | GSE15244 | 44517207 | 44518212 | 1005 | 0 |
| TFAP2C | MCF7 | GSE21234 | 44446958 | 44447389 | 431 | 0 |
| TFAP2C | MCF7 | GSE21234 | 44463392 | 44463780 | 388 | 0 |
| USF2 | HepG2 | E | 44517207 | 44517455 | 248 | 0 |
| hScc1 | Bcell | GSE12603 | 44446143 | 44447278 | 1135 | 0 |
| hScc1 | Bcell | GSE12603 | 44534072 | 44534240 | 168 | 0 |
| hScc1 | Bcell | GSE12603 | 44609516 | 44610084 | 568 | 0 |
| p130 | Quiescent | GSE19898 | 44467207 | 44467351 | 144 | 0 |
| p130 | shRbQuiescent | GSE19898 | 44446185 | 44446652 | 467 | 0 |
| p63 | keratinocytes | GSE17611 | 44478300 | 44478743 | 443 | 0 |
Validated miRNA targets