Annotation Detail for TMEM184B

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Basic Information Top

Gene Symbol:	TMEM184B ( C22orf5,DKFZp586A1024,DKFZp686F07174,DKFZp686N1150,FM08,HS5O6A )
Gene Full Name:	transmembrane protein 184B
Band:	22q13.1
Quick Links	Entrez ID:25829; OMIM: NA; Uniprot ID:T184B_HUMAN; ENSEMBL ID: ENSG00000198792; HGNC ID: 1310
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Fos	K562	GSE19551	37004646	37005040	394	5882
H3ac	HepG2	E	37000747	37001016	269	1920
USF1	HepG2	E	37002182	37002535	353	3397

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CBP	T30-glioblastoma	GSE21026	36943488	36945763	2275	618
NFkBII	GM10847	GSE19485	36944038	36945344	1306	553
NFkBII	GM12878	GSE19485	36943832	36945215	1383	720
NFkBII	GM12892	GSE19485	36943805	36945439	1634	622
NFkBII	GM15510	GSE19485	36944087	36945327	1240	537
NFkBII	GM18505	GSE19485	36944141	36945139	998	604
NFkBII	GM18526	GSE19485	36944108	36945166	1058	607
TFAP2C	MCF7	GSE21234	36944410	36944974	564	552

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
CTCF	G2	GSE9613	36955514	36956237	723
CTCF	G2	GSE9613	36956699	36957028	329
CTCF	G2	GSE9613	36973685	36974202	517
CTCF	G2	GSE9613	36988297	36988549	252
ER	MCF7	GSE19013	36948707	36949144	437
ER	MCF7	GSE19013	36962656	36963125	469
FOXA1	MCF7	GSE15244	36954631	36956279	1648
FOXA1	MCF7	GSE15244	36990073	36990321	248
H3ac	HepG2	E	36997214	36998452	1238
Myc	K562	GSE19551	36991999	36992509	510
NFkBII	GM12878	GSE19485	36985797	36987098	1301
P300	T0-glioblastoma	GSE21026	36954440	36955481	1041
P300	T30-glioblastoma	GSE21026	36954301	36956135	1834
PHF8	HeLa	GSE20725	36998284	36999222	938
RARA	MCF7	GSE15244	36955252	36956237	985
RARG	MCF7	GSE15244	36955514	36956237	723
TFAP2C	MCF7	GSE21234	36948763	36949213	450
TFAP2C	MCF7	GSE21234	36997777	36998320	543
hScc1	Bcell	GSE12603	36950824	36951042	218
hScc1	Bcell	GSE12603	36955080	36956312	1232
hScc1	Bcell	GSE12603	36964480	36965104	624
hScc1	Bcell	GSE12603	36969238	36969605	367
hScc1	Bcell	GSE12603	36986657	36986907	250
hScc1	Bcell	GSE12603	36988297	36988758	461
hScc1	Bcell	GSE12603	36997965	36998389	424
p130	Quiescent	GSE19898	36982601	36982717	116
p130	Senescent	GSE19898	36964905	36965713	808
p130	shRbQuiescent	GSE19898	36964800	36965206	406
p130	shRbQuiescent	GSE19898	36969179	36969632	453
p130	shRbSenescent	GSE19898	36966977	36967292	315

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-let-7b	hsa-let-7b	22	15131085
hsa-let-7b*	hsa-let-7b	22	15131085
hsa-let-7e	hsa-let-7e	19	15131085
hsa-let-7e*	hsa-let-7e	19	15131085
hsa-miR-103	hsa-mir-103-2	20	15131085
hsa-miR-103	hsa-mir-103-1	5	15131085
hsa-miR-141	hsa-mir-141	12	15131085
hsa-miR-141*	hsa-mir-141	12	15131085
hsa-miR-145	hsa-mir-145	5	15131085
hsa-miR-145*	hsa-mir-145	5	15131085
hsa-miR-15a	hsa-mir-15a	13	15131085
hsa-miR-15a*	hsa-mir-15a	13	15131085
hsa-miR-15b	hsa-mir-15b	3	15131085
hsa-miR-15b*	hsa-mir-15b	3	15131085
hsa-miR-16	hsa-mir-16-1	13	15131085
hsa-miR-16	hsa-mir-16-2	3	15131085
hsa-miR-199b-3p	hsa-mir-199b	9	15131085
hsa-miR-199b-5p	hsa-mir-199b	9	15131085
hsa-miR-23a	hsa-mir-23a	19	15131085
hsa-miR-23a*	hsa-mir-23a	19	15131085
hsa-miR-24	hsa-mir-24-1	9	15131085
hsa-miR-24	hsa-mir-24-2	19	15131085

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018