AutismKB 2.0

Annotation Detail for PARM1


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Basic Information Top
Gene Symbol:PARM1 ( Cipar1,DKFZP564O0823,PARM-1,WSC4 )
Gene Full Name: prostate androgen-regulated mucin-like protein 1
Band: 4q13.3
Quick LinksEntrez ID:25849; OMIM: NA; Uniprot ID:PARM1_HUMAN; ENSEMBL ID: ENSG00000169116; HGNC ID: 24536
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
58N-linked (GlcNAc...) (Potential).
62N-linked (GlcNAc...) (Potential).
80N-linked (GlcNAc...) (Potential).
176N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
58N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
62N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
80N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
176N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
20O-linkedHMM predict
24Phosphoserine(IKK)HMM predict
28Phosphoserine(IKK)HMM predict
30Phosphoserine(IKK)HMM predict
40O-linkedHMM predict
45Phosphoserine(CDC2)HMM predict
49O-linkedHMM predict
49Phosphothreonine(CK2)HMM predict
58N-linkedHMM predict
62N-linkedHMM predict
63N-linkedHMM predict
71Phosphoserine(IKK)HMM predict
75Phosphoserine(MAPK)HMM predict
85Phosphoserine(CK2)HMM predict
92Phosphoserine(CDC2)HMM predict
92Phosphoserine(MAPK)HMM predict
105O-linkedHMM predict
107O-linkedHMM predict
113O-linkedHMM predict
126Phosphoserine(CK1)HMM predict
126O-linkedHMM predict
127Phosphoserine(ATM)HMM predict
127Phosphoserine(CK2)HMM predict
139Phosphoserine(ATM)HMM predict
150Phosphoserine(CDC2)HMM predict
150O-linkedHMM predict
157Phosphoserine(CDK)HMM predict
157O-linkedHMM predict
157Phosphoserine(CDC2)HMM predict
159O-linkedHMM predict
159Phosphoserine(CK1)HMM predict
160Phosphoserine(IKK)HMM predict
163O-linkedHMM predict
164Phosphoserine(CDC2)HMM predict
164PhosphoserineHMM predict
164Phosphoserine(IKK)HMM predict
174Phosphothreonine(PKC)HMM predict
176N-linkedHMM predict
179O-linkedHMM predict
179O-linkedHMM predict
182O-linkedHMM predict
183O-linkedHMM predict
183O-linkedHMM predict
187O-linkedHMM predict
191O-linkedHMM predict
195Phosphoserine(MAPK)HMM predict
201O-linkedHMM predict
201Phosphoserine(CK1)HMM predict
202Phosphoserine(ATM)HMM predict
202Phosphoserine(CK1)HMM predict
202O-linkedHMM predict
205Phosphothreonine(CDC2)HMM predict
205Phosphothreonine(MAPK)HMM predict
208O-linkedHMM predict
211O-linkedHMM predict
211O-linkedHMM predict
220Phosphothreonine(MAPK)HMM predict
255Phosphoserine(CK1)HMM predict
296Phosphotyrosine(INSR)HMM predict
296SulfotyrosineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_015393
  • Location:chr4 76077321-76194346
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 76076826 76077604 778 107
Oct1 HelaGSE14283 76076001 76076029 28 1307
TFAP2C MCF7GSE21234 76076866 76077463 597 157
hScc1 CdLSGSE12603 76076826 76077753 927 32
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 76196559 76196807 248 2337
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 76088651 76088863 212 0
CTCF G2GSE9613 76148555 76148946 391 0
CTCF G2GSE9613 76155945 76156299 354 0
CTCF G2GSE9613 76156831 76157206 375 0
CTCF G2GSE9613 76171312 76171476 164 0
CTCF G2GSE9613 76178987 76179214 227 0
CTCF G2GSE9613 76179645 76179793 148 0
CTCF G2GSE9613 76191193 76191338 145 0
CTCF G2GSE9613 76192303 76193090 787 0
H3K4me3 colorectalcancer 76078063 76078989 926 0
NFkBII GM12878GSE19485 76111829 76113934 2105 0
NFkBII GM12878GSE19485 76118888 76120830 1942 0
NFkBII GM12892GSE19485 76112271 76113922 1651 0
NFkBII GM12892GSE19485 76119581 76120883 1302 0
NFkBII GM12892GSE19485 76174426 76175813 1387 0
Oct1 H2O2-HelaGSE14283 76182125 76182166 41 0
Oct1 HelaGSE14283 76182125 76182165 40 0
TFAP2C MCF7GSE21234 76184935 76185239 304 0
hScc1 BcellGSE12603 76076826 76078017 1191 0
hScc1 BcellGSE12603 76168584 76168877 293 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
19833 mRNA DKFZP564O0823 chr4 76215476 76332502 245 EST chr4 76332257 76332502Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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