Annotation Detail for DCAF13

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Basic Information Top

Gene Symbol:	DCAF13 ( DKFZp564O0463,GM83,MGC126859,MGC138247,WDSOF1 )
Gene Full Name:	DDB1 and CUL4 associated factor 13
Band:	8q22.3
Quick Links	Entrez ID:25879; OMIM: NA; Uniprot ID:DCA13_HUMAN; ENSEMBL ID: ENSG00000164934; HGNC ID: 24535
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
49	N6-acetyllysine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_015420
Location:chr8 104496117-104524375
strand:+

Upstream the gene:0 results
Downstream the gene:1 results
Inside the gene:19 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
TFAP2C	MCF7	GSE21234	104531492	104532113	621	7427

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	104496144	104496805	661	0
ETS1	Jurkat	GSE17954	104495846	104497301	1455	0
FOXA1	MCF7	GSE15244	104495885	104497842	1957	0
FOXA1	MCF7	GSE15244	104500910	104501091	181	0
GABP	Hela	GSE8489	104496805	104498129	1324	0
GABP	k562	GSE8489	104496769	104497807	1038	0
H3K4me2	HCT116	GSE10453	104497084	104498129	1045	0
H3K4me3	colorectal	cancer	104496805	104497701	896	0
H3ac	HepG2	E	104496769	104498184	1415	0
PHF8	293T	GSE20725	104495965	104497189	1224	0
RARA	MCF7	GSE15244	104496674	104497774	1100	0
RARG	MCF7	GSE15244	104496877	104497774	897	0
Rb	Quiescent	GSE19898	104496505	104496977	472	0
Rb	Senescent	GSE19898	104496887	104497054	167	0
Rb	shRbQuiescent	GSE19898	104496508	104496758	250	0
USF1	HepG2	E	104495562	104498165	2603	0
USF2	HepG2	E	104496598	104498093	1495	0
p130	Senescent	GSE19898	104496376	104496934	558	0
p130	shRbQuiescent	GSE19898	104496041	104497068	1027	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
25800	mRNA	WDSOF1	chr8	104496117	104524376	260	mRNA	MFTC	chr8	104480042	104496447	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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