Annotation Detail for GALNT3
Basic Information Top
| Gene Symbol: | GALNT3 ( DKFZp686C10199,GalNAc-T3,HFTC,HHS,MGC61909 ) |
|---|---|
| Gene Full Name: | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3) |
| Band: | 2q24.3 |
| Quick Links | Entrez ID:2591; OMIM: 601756; Uniprot ID:GALT3_HUMAN; ENSEMBL ID: ENSG00000115339; HGNC ID: 4125 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 132 | N-linked (GlcNAc...) (Potential). | |
| 297 | N-linked (GlcNAc...) (Potential). | |
| 484 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 132 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 297 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 484 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 46 | Phosphoserine(IKK) | HMM predict |
| 159 | Phosphoserine(CK1) | HMM predict |
| 212 | Phosphoserine(CDC2) | HMM predict |
| 297 | N-linked | HMM predict |
| 320 | Phosphoserine(CDC2) | HMM predict |
| 359 | O-linked | HMM predict |
| 376 | Sulfotyrosine | HMM predict |
| 380 | Sulfotyrosine | HMM predict |
| 456 | Phosphothreonine(PKA) | HMM predict |
| 484 | N-linked | HMM predict |
| 490 | N-linked | HMM predict |
| 508 | Phosphotyrosine(Jak) | HMM predict |
| 619 | N-linked | HMM predict |
- RefSeq ID: NM_004482
- Location:chr2 166311569-166335455
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 166343548 | 166343828 | 280 | 8233 |
| FOXA1 | MCF7 | GSE15244 | 166342264 | 166343126 | 862 | 7240 |
| FOXA1 | MCF7 | GSE15244 | 166343548 | 166343828 | 280 | 8233 |
| FoxA1 | MCF7 | MACSdata | 166342953 | 166343320 | 367 | 7681 |
| Oct1 | H2O2-Hela | GSE14283 | 166344572 | 166344622 | 50 | 9142 |
| Oct1 | Hela | GSE14283 | 166344570 | 166344621 | 51 | 9140 |
| hScc1 | Bcell | GSE12603 | 166343548 | 166343828 | 280 | 8233 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | E2-MCF7 | GSE14664 | 166294033 | 166294124 | 91 | 17491 |
| ER | Fulvestrant-MCF7 | GSE14664 | 166301003 | 166301083 | 80 | 10527 |
| ER | Fulvestrant-MCF7 | GSE14664 | 166304397 | 166304437 | 40 | 7153 |
| RNAII | Tamoxifen-MCF7 | GSE14664 | 166292989 | 166293027 | 38 | 18562 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | Hela | GSE14283 | 166327210 | 166327247 | 37 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15221 | EST | chr2 | 166428839 | 166432053 | 199 | mRNA | GALNT3 | chr2 | 166428830 | 166452717 | Sense/Antisense (SA) pairs | |