AutismKB 2.0

Annotation Detail for NALCN


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:NALCN ( CanIon,FLJ23913,FLJ44659,FLJ44764,MGC74524,VGCNL1,bA430M15.1 )
Gene Full Name: sodium leak channel, non-selective
Band: 13q32.3-q33.1
Quick LinksEntrez ID:259232; OMIM: 611549; Uniprot ID:NALCN_HUMAN; ENSEMBL ID: ENSG00000102452; HGNC ID: 19082
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
497Phosphotyrosine.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_052867
  • Location:chr13 100504130-100866813
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 100870236 100870288 52 3449
P300 T0-glioblastomaGSE21026 100867212 100868210 998 898
P300 T30-glioblastomaGSE21026 100867277 100867907 630 779
TFAP2C MCF7GSE21234 100867418 100867744 326 768
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 100708106 100709248 1142 0
CTCF CD4GSE12889 100552011 100552155 144 0
CTCF CD4GSE12889 100595280 100595573 293 0
CTCF CD4SISSRdata 100552011 100552155 144 0
CTCF CD4SISSRdata 100595280 100595573 293 0
CTCF G2GSE9613 100508422 100508567 145 0
CTCF G2GSE9613 100551948 100552364 416 0
CTCF G2GSE9613 100792717 100792856 139 0
CTCF G2GSE9613 100865748 100867133 1385 0
ER Fulvestrant-MCF7GSE14664 100676785 100676823 38 0
Oct1 H2O2-HelaGSE14283 100613777 100613807 30 0
Oct1 H2O2-HelaGSE14283 100738536 100738577 41 0
Oct1 H2O2-HelaGSE14283 100786424 100786453 29 0
Oct1 H2O2-HelaGSE14283 100823231 100823264 33 0
Oct1 HelaGSE14283 100584300 100584341 41 0
Oct1 HelaGSE14283 100613730 100613804 74 0
Oct1 HelaGSE14283 100676791 100676822 31 0
Oct1 HelaGSE14283 100676932 100676960 28 0
Oct1 HelaGSE14283 100738541 100738576 35 0
Oct1 HelaGSE14283 100786424 100786453 29 0
Oct1 HelaGSE14283 100805280 100805311 31 0
Oct1 HelaGSE14283 100823168 100823261 93 0
Oct1 HelaGSE14283 100857205 100857239 34 0
Oct4 hESGSE17917 100866402 100866828 426 0
P300 T30-glioblastomaGSE21026 100708121 100709327 1206 0
RNAII Tamoxifen-MCF7GSE14664 100564566 100564689 123 0
hScc1 BcellGSE12603 100595190 100595818 628 0
hScc1 BcellGSE12603 100866252 100867108 856 0
hScc1 CdLSGSE12603 100595001 100595673 672 0
hScc1 CdLSGSE12603 100600695 100600918 223 0
hScc1 G2GSE9613 100594550 100595967 1417 0
hScc1 G2GSE9613 100600695 100600989 294 0
hScc1 G2GSE9613 100865788 100867108 1320 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved