AutismKB 2.0

Annotation Detail for FAM98A


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:FAM98A ( DKFZp564F0522,DKFZp686O03192 )
Gene Full Name: family with sequence similarity 98, member A
Band: 2p22.3
Quick LinksEntrez ID:25940; OMIM: NA; Uniprot ID:FA98A_HUMAN; ENSEMBL ID: ENSG00000119812; HGNC ID: 24520
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
19Phosphotyrosine(Syk)HMM predict
30Phosphoserine(ATM)HMM predict
34O-linkedHMM predict
39Phosphoserine(CDC2)HMM predict
68Phosphoserine(CDC2)HMM predict
70Phosphoserine(CK2)HMM predict
90Phosphotyrosine(Jak)HMM predict
161N-linkedHMM predict
242Phosphoserine(PKG)HMM predict
259Phosphoserine(CDC2)HMM predict
306MethylarginineHMM predict
337MethylarginineHMM predict
341MethylarginineHMM predict
364MethylarginineHMM predict
367Phosphotyrosine(INSR)HMM predict
395Phosphotyrosine(INSR)HMM predict
419Phosphotyrosine(INSR)HMM predict
434O-linkedHMM predict
458MethylarginineHMM predict
486Phosphoserine(ATM)HMM predict
507N-linkedHMM predict
509SerineHMM predict
515ArginineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_015475
  • Location:chr2 33662232-33677865
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 33677389 33678520 1131 89
HIF1 HypoHepG2 33677559 33678635 1076 232
Oct1 H2O2-HelaGSE14283 33696723 33696749 26 18871
Oct1 HelaGSE14283 33696719 33696750 31 18869
Rb GrowingGSE19898 33677973 33678251 278 247
p130 SenescentGSE19898 33678024 33678526 502 410
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 33661875 33662269 394 161
ER E2-MCF7GSE14664 33656033 33656069 36 6182
Nanog hESGSE18292 33661741 33662657 916 34
Oct1 HelaGSE14283 33656033 33656076 43 6178
hScc1 BcellGSE12603 33661627 33661997 370 421
hScc1 G2GSE9613 33661802 33662163 361 250
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 33677400 33678048 648 0
FOXA1 MCF7GSE15244 33677031 33678414 1383 0
H3K4me3 colorectalcancer 33676305 33677644 1339 0
H3ac HepG2E 33675712 33678776 3064 0
HIF1 NormHepG2 33677400 33678301 901 0
Oct1 H2O2-HelaGSE14283 33677182 33677209 27 0
Oct1 HelaGSE14283 33677181 33677217 36 0
PHF8 293TGSE20725 33677243 33678432 1189 0
PHF8 HeLaGSE20725 33677176 33678497 1321 0
p130 SenescentGSE19898 33677373 33677967 594 0
p130 shRbQuiescentGSE19898 33677404 33678071 667 0
p130 shRbSenescentGSE19898 33677274 33677992 718 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
14128 EST chr2 33721620 33722251 546 mRNA DKFZP564F0522 chr2 33720379 33736013Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved