Annotation Detail for PNKD
Basic Information
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| Gene Symbol: | PNKD ( BRP17,DKFZp564N1362,DYT8,FPD1,KIAA1184,KIPP1184,MGC31943,MR-1,MR1,PDC,TAHCCP2 ) |
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| Gene Full Name: | paroxysmal nonkinesigenic dyskinesia |
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| Band: | 2q35 |
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| Quick Links | Entrez ID:25953; OMIM: 609023; Uniprot ID:PNKD_HUMAN; ENSEMBL ID: ENSG00000127838; HGNC ID: 9153 |
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| Relate to Another Database: |
SFARIGene;
denovo-db |
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
- RefSeq ID: NM_001077399
- Location:chr2 218843358-218845911
- strand:+
| Transcrip Factors |
Experimental Cell |
Database |
TF Binding Start |
TF Binding End |
TF Binding Length |
The Distance to Gene |
|---|
| ETS1 |
Jurkat | GSE17954 | 218842689 |
218843991 |
1302 |
19 |
| Rb |
Growing | GSE19898 | 218843258 |
218843412 |
154 |
24 |
| Rb |
Quiescent | GSE19898 | 218843247 |
218843402 |
155 |
34 |
| Rb |
Senescent | GSE19898 | 218843000 |
218843708 |
708 |
5 |
| Transcrip Factors |
Experimental Cell |
Database |
TF Binding Start |
TF Binding End |
TF Binding Length |
The Distance to Gene |
|---|
| CTCF |
CD4 | GSE12889 | 218845638 |
218846019 |
381 |
0 |
| CTCF |
CD4 | SISSRdata | 218845638 |
218846019 |
381 |
0 |
| CTCF |
G2 | GSE9613 | 218844050 |
218844404 |
354 |
0 |
| CTCF |
G2 | GSE9613 | 218845182 |
218846031 |
849 |
0 |
| H3K4me3 |
colorectal | cancer | 218844404 |
218844798 |
394 |
0 |
| H3ac |
HepG2 | E | 218843775 |
218845225 |
1450 |
0 |
| hScc1 |
Bcell | GSE12603 | 218845182 |
218846031 |
849 |
0 |
| hScc1 |
CdLS | GSE12603 | 218845448 |
218846172 |
724 |
0 |
| hScc1 |
G2 | GSE9613 | 218842720 |
218844294 |
1574 |
0 |
| hScc1 |
G2 | GSE9613 | 218845307 |
218846068 |
761 |
0 |
| p130 |
Quiescent | GSE19898 | 218843285 |
218843445 |
160 |
0 |
| p130 |
Senescent | GSE19898 | 218843554 |
218844010 |
456 |
0 |
| p130 |
shRbQuiescent | GSE19898 | 218843261 |
218843643 |
382 |
0 |
Post Translation Modification