AutismKB 2.0

Annotation Detail for ATRNL1


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Basic Information Top
Gene Symbol:ATRNL1 ( ALP,FLJ45344,KIAA0534,bA338L11.1,bA454H24.1 )
Gene Full Name: attractin-like 1
Band: 10q25.3
Quick LinksEntrez ID:26033; OMIM: 612869; Uniprot ID:ATRN1_HUMAN; ENSEMBL ID: ENSG00000107518; HGNC ID: 29063
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
76N-linked (GlcNAc...) (Potential).
174N-linked (GlcNAc...) (Potential).
198N-linked (GlcNAc...) (Potential).
380N-linked (GlcNAc...) (Potential).
763N-linked (GlcNAc...) (Potential).
778N-linked (GlcNAc...) (Potential).
898N-linked (GlcNAc...) (Potential).
1157N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_207303
  • Location:chr10 116843113-117698483
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K27me3 colorectalcancer 116841496 116842333 837 1199
Oct1 HelaGSE14283 116825897 116825939 42 17196
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 117713096 117713208 112 14669
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 117104783 117104968 185 0
CTCF CD4SISSRdata 117104783 117104968 185 0
CTCF JurkatGSE12889 117086418 117086510 92 0
ER E2-MCF7GSE14664 116933749 116933782 33 0
ER E2-MCF7GSE14664 116971562 116971595 33 0
ER E2-MCF7GSE14664 117057303 117057336 33 0
ER E2-MCF7GSE14664 117248256 117248348 92 0
ER E2-MCF7GSE14664 117270235 117270269 34 0
ER E2-MCF7GSE14664 117391947 117392016 69 0
ER E2-MCF7GSE14664 117465236 117465272 36 0
ER Fulvestrant-MCF7GSE14664 117115100 117115138 38 0
ER Fulvestrant-MCF7GSE14664 117601002 117601073 71 0
FOXA1 MCF7GSE15244 117402954 117403430 476 0
FoxA1 MCF7MACSdata 117316342 117316711 369 0
FoxA1 MCF7MACSdata 117403067 117403269 202 0
GABP k562GSE8489 117191927 117192296 369 0
KLF4 hESGSE17917 117545710 117545868 158 0
NRSF JurkatSISSRdata 117167242 117167392 150 0
Nanog ESGSE20650 117135834 117136183 349 0
Nanog ESGSE20650 117508143 117508431 288 0
Nanog ESGSE20650 117550873 117551430 557 0
Nanog ESGSE20650 117631555 117631908 353 0
Nanog hESGSE18292 117181857 117182088 231 0
Nanog hESGSE18292 117550894 117551266 372 0
Nanog hESGSE18292 117631578 117631877 299 0
Oct1 H2O2-HelaGSE14283 116850607 116850640 33 0
Oct1 H2O2-HelaGSE14283 116911614 116911641 27 0
Oct1 H2O2-HelaGSE14283 117057444 117057475 31 0
Oct1 H2O2-HelaGSE14283 117075582 117075615 33 0
Oct1 H2O2-HelaGSE14283 117102024 117102069 45 0
Oct1 H2O2-HelaGSE14283 117122923 117122951 28 0
Oct1 H2O2-HelaGSE14283 117125315 117125345 30 0
Oct1 H2O2-HelaGSE14283 117188576 117188613 37 0
Oct1 H2O2-HelaGSE14283 117196182 117196212 30 0
Oct1 H2O2-HelaGSE14283 117277464 117277493 29 0
Oct1 H2O2-HelaGSE14283 117318764 117318795 31 0
Oct1 H2O2-HelaGSE14283 117336476 117336505 29 0
Oct1 H2O2-HelaGSE14283 117347062 117347089 27 0
Oct1 H2O2-HelaGSE14283 117517213 117517245 32 0
Oct1 H2O2-HelaGSE14283 117540743 117540771 28 0
Oct1 H2O2-HelaGSE14283 117597176 117597203 27 0
Oct1 H2O2-HelaGSE14283 117690318 117690357 39 0
Oct1 HelaGSE14283 116869462 116869498 36 0
Oct1 HelaGSE14283 116871254 116871289 35 0
Oct1 HelaGSE14283 116911584 116911651 67 0
Oct1 HelaGSE14283 116927771 116927810 39 0
Oct1 HelaGSE14283 116967492 116967532 40 0
Oct1 HelaGSE14283 116971383 116971411 28 0
Oct1 HelaGSE14283 116971549 116971591 42 0
Oct1 HelaGSE14283 117051094 117051153 59 0
Oct1 HelaGSE14283 117057442 117057477 35 0
Oct1 HelaGSE14283 117075576 117075620 44 0
Oct1 HelaGSE14283 117102035 117102076 41 0
Oct1 HelaGSE14283 117115102 117115141 39 0
Oct1 HelaGSE14283 117115631 117115659 28 0
Oct1 HelaGSE14283 117122899 117122984 85 0
Oct1 HelaGSE14283 117201068 117201095 27 0
Oct1 HelaGSE14283 117241532 117241572 40 0
Oct1 HelaGSE14283 117242810 117242849 39 0
Oct1 HelaGSE14283 117258198 117258239 41 0
Oct1 HelaGSE14283 117334257 117334293 36 0
Oct1 HelaGSE14283 117372793 117372826 33 0
Oct1 HelaGSE14283 117465242 117465274 32 0
Oct1 HelaGSE14283 117517211 117517249 38 0
Oct1 HelaGSE14283 117526683 117526723 40 0
Oct1 HelaGSE14283 117530491 117530535 44 0
Oct1 HelaGSE14283 117591033 117591078 45 0
Oct1 HelaGSE14283 117600998 117601081 83 0
Oct1 HelaGSE14283 117690318 117690357 39 0
Pol3 GM12878GSE19551 116933139 116933498 359 0
RARA MCF7GSE15244 117598632 117599070 438 0
RNAII Tamoxifen-MCF7GSE14664 117112697 117112791 94 0
Rb shRbQuiescentGSE19898 117585950 117586144 194 0
USF1 HepG2E 117414392 117414703 311 0
hScc1 BcellGSE12603 117545410 117545661 251 0
hScc1 BcellGSE12603 117549003 117549298 295 0
hScc1 CdLSGSE12603 116879154 116879905 751 0
hScc1 CdLSGSE12603 117118696 117118924 228 0
hScc1 CdLSGSE12603 117181843 117182162 319 0
hScc1 CdLSGSE12603 117548766 117549298 532 0
hScc1 G2GSE9613 117548969 117549298 329 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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