AutismKB 2.0

Annotation Detail for CHD5


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Basic Information Top
Gene Symbol:CHD5 ( DKFZp434N231,KIAA0444 )
Gene Full Name: chromodomain helicase DNA binding protein 5
Band: 1p36.31
Quick LinksEntrez ID:26038; OMIM: 610771; Uniprot ID:CHD5_HUMAN; ENSEMBL ID: ENSG00000116254; HGNC ID: 16816
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
850DEAH box.
858N6-acetyllysine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
7Phosphothreonine(CK2)HMM predict
7Phosphothreonine(PKC)HMM predict
26Phosphoserine(CK1)HMM predict
26Phosphoserine(CK2)HMM predict
76Phosphoserine(CK2)HMM predict
76Phosphoserine(CK2)HMM predict
76Phosphoserine(CK1)HMM predict
86Phosphoserine(CK1)HMM predict
88Phosphoserine(CK2)HMM predict
91Phosphoserine(CK1)HMM predict
93Phosphotyrosine(INSR)HMM predict
155Phosphotyrosine(Syk)HMM predict
219O-linkedHMM predict
221O-linkedHMM predict
229O-linkedHMM predict
289Phosphoserine(CK2)HMM predict
289PhosphoserineHMM predict
290Phosphoserine(CK2)HMM predict
291Phosphoserine(CK2)HMM predict
291PhosphoserineHMM predict
299Phosphoserine(PKB)HMM predict
303O-linkedHMM predict
330MethyllysineHMM predict
338Phosphotyrosine(Syk)HMM predict
430S-palmitoylHMM predict
431S-palmitoylHMM predict
434S-palmitoylHMM predict
460S-palmitoylHMM predict
496O-linkedHMM predict
556SulfotyrosineHMM predict
558Phosphoserine(CK2)HMM predict
558Phosphoserine(CK2)HMM predict
575PhosphotyrosineHMM predict
575Phosphotyrosine(INSR)HMM predict
575Phosphotyrosine(Jak)HMM predict
634SulfotyrosineHMM predict
776Phosphotyrosine(Jak)HMM predict
855N-linkedHMM predict
997Phosphotyrosine(Abl)HMM predict
1011N-linkedHMM predict
1022Phosphoserine(CDC2)HMM predict
1062SulfotyrosineHMM predict
1183Phosphoserine(IKK)HMM predict
1185Phosphothreonine(PKC)HMM predict
1210Phosphoserine(ATM)HMM predict
1240Phosphoserine(PKA)HMM predict
1241Phosphothreonine(CDK)HMM predict
1328SulfotyrosineHMM predict
1366Phosphoserine(ATM)HMM predict
1366Phosphoserine(CK1)HMM predict
1368N-linkedHMM predict
1370Phosphoserine(CK1)HMM predict
1373Phosphoserine(CK1)HMM predict
1376Phosphoserine(CK2)HMM predict
1396Phosphoserine(PKG)HMM predict
1467Phosphotyrosine(EGFR)HMM predict
1549Phosphothreonine(MAPK)HMM predict
1554Phosphoserine(CDC2)HMM predict
1554PhosphoserineHMM predict
1575Phosphotyrosine(INSR)HMM predict
1575SulfotyrosineHMM predict
1604PhosphoserineHMM predict
1631O-linkedHMM predict
1631PhosphoserineHMM predict
1765Phosphotyrosine(Jak)HMM predict
1781Phosphotyrosine(INSR)HMM predict
1813N-linkedHMM predict
1819N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_015557
  • Location:chr1 6084439-6162769
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K27me3 colorectalcancer 6164130 6164677 547 1634
H3K27me3 colorectalcancer 6165015 6165248 233 2362
hScc1 BcellGSE12603 6162142 6163684 1542 144
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 6083419 6084144 725 658
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 6153530 6153907 377 0
CTCF CD4GSE12889 6091572 6091716 144 0
CTCF CD4SISSRdata 6091572 6091716 144 0
CTCF HelaGSE12889 6091414 6091703 289 0
CTCF G2GSE9613 6084964 6085307 343 0
CTCF G2GSE9613 6087178 6087413 235 0
CTCF G2GSE9613 6088128 6088809 681 0
CTCF G2GSE9613 6089171 6089435 264 0
CTCF G2GSE9613 6091595 6091801 206 0
CTCF G2GSE9613 6092425 6092796 371 0
CTCF G2GSE9613 6111155 6111746 591 0
CTCF G2GSE9613 6112799 6113124 325 0
CTCF G2GSE9613 6129121 6129245 124 0
CTCF G2GSE9613 6130959 6131876 917 0
CTCF G2GSE9613 6134495 6134979 484 0
CTCF G2GSE9613 6136947 6137170 223 0
CTCF G2GSE9613 6137607 6137920 313 0
CTCF G2GSE9613 6142460 6143167 707 0
CTCF G2GSE9613 6145849 6146468 619 0
CTCF G2GSE9613 6148202 6149463 1261 0
CTCF G2GSE9613 6153932 6154737 805 0
CTCF G2GSE9613 6155262 6155709 447 0
CTCF G2GSE9613 6160085 6160569 484 0
CTCF G2GSE9613 6162101 6163266 1165 0
ER MCF7GSE19013 6089333 6089860 527 0
ER MCF7GSE19013 6140344 6141165 821 0
Fos K562GSE19551 6140257 6140836 579 0
H3K27me3 colorectalcancer 6160341 6160601 260 0
Myc K562GSE19551 6110171 6110985 814 0
Myc K562GSE19551 6124225 6124761 536 0
NRSF JurkatGSE13047 6143087 6144861 1774 0
NRSF mAbJurkat 6140260 6141145 885 0
NRSF mAbJurkat 6142089 6144538 2449 0
NRSF mAbJurkat 6145070 6147452 2382 0
NRSF-mono JurkatQuESTdata 6143752 6144842 1090 0
NRSF-poly JurkatQuESTdata 6143087 6144908 1821 0
Oct1 HelaGSE14283 6134434 6134464 30 0
P300 T30-glioblastomaGSE21026 6140315 6140677 362 0
RARA MCF7GSE15244 6140362 6141145 783 0
RARA MCF7GSE15244 6155262 6155709 447 0
STAT1 HeLaGSE12782 6143353 6145012 1659 0
STAT1 HeLaGSE12783 6143353 6144978 1625 0
TFAP2C MCF7GSE21234 6124274 6124606 332 0
TFAP2C MCF7GSE21234 6139979 6141127 1148 0
TFAP2C MCF7GSE21234 6155198 6155642 444 0
hScc1 BcellGSE12603 6085022 6085307 285 0
hScc1 BcellGSE12603 6089065 6089435 370 0
hScc1 BcellGSE12603 6091595 6091869 274 0
hScc1 BcellGSE12603 6108208 6109391 1183 0
hScc1 BcellGSE12603 6112717 6113464 747 0
hScc1 BcellGSE12603 6116838 6117084 246 0
hScc1 BcellGSE12603 6129082 6129409 327 0
hScc1 BcellGSE12603 6133878 6134231 353 0
hScc1 BcellGSE12603 6134632 6134782 150 0
hScc1 BcellGSE12603 6136797 6137170 373 0
hScc1 BcellGSE12603 6137679 6138013 334 0
hScc1 BcellGSE12603 6140226 6140722 496 0
hScc1 BcellGSE12603 6142151 6142959 808 0
hScc1 BcellGSE12603 6145568 6145957 389 0
hScc1 BcellGSE12603 6153764 6154201 437 0
hScc1 CdLSGSE12603 6091595 6091906 311 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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