AutismKB 2.0

Annotation Detail for GIGYF2


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Basic Information Top
Gene Symbol:GIGYF2 ( DKFZp686I15154,DKFZp686J17223,FLJ23368,GYF2,KIAA0642,PARK11,PERQ2,PERQ3,TNRC15 )
Gene Full Name: GRB10 interacting GYF protein 2
Band: 2q37.1
Quick LinksEntrez ID:26058; OMIM: 612003; Uniprot ID:PERQ2_HUMAN; ENSEMBL ID: ENSG00000204120; HGNC ID: 11960
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
19Phosphoserine.
20Phosphoserine.
25Phosphothreonine.
26Phosphoserine.
30Phosphoserine.
158Phosphoserine.
160Phosphoserine.
189Phosphoserine.
236Phosphoserine.
242Phosphoserine.
370Phosphothreonine.
373Phosphothreonine.
376Phosphoserine.
382Phosphothreonine.
593Phosphoserine.
Location(AA) Modifications Resource
25Phosphothreonine (By similarity).Swiss-Prot 53.0
26Phosphoserine.Swiss-Prot 53.0
26PhosphoserinePhospho.ELM 6.0
30Phosphoserine.Swiss-Prot 53.0
30PhosphoserinePhospho.ELM 6.0
158Phosphoserine.Swiss-Prot 53.0
158PhosphoserinePhospho.ELM 6.0
236PhosphoserinePhospho.ELM 6.0
236Phosphoserine.Swiss-Prot 53.0
242PhosphoserinePhospho.ELM 6.0
242Phosphoserine.Swiss-Prot 53.0
382Phosphothreonine.Swiss-Prot 53.0
382PhosphothreoninePhospho.ELM 6.0
Location(AA) Modification Resource
23Phosphoserine(IKK)HMM predict
26Phosphoserine(MAPK)HMM predict
26O-linkedHMM predict
30Phosphoserine(CDC2)HMM predict
30O-linkedHMM predict
30Phosphoserine(CDK)HMM predict
30Phosphoserine(MAPK)HMM predict
93Phosphoserine(PKB)HMM predict
118MethylarginineHMM predict
121PhosphoserineHMM predict
122Phosphoserine(CDC2)HMM predict
124MethylarginineHMM predict
126MethylarginineHMM predict
128MethylarginineHMM predict
158Phosphoserine(ATM)HMM predict
236Phosphoserine(IKK)HMM predict
236Phosphoserine(CDC2)HMM predict
268Phosphotyrosine(EGFR)HMM predict
277Phosphoserine(CK2)HMM predict
284Phosphoserine(CK1)HMM predict
335Phosphoserine(ATM)HMM predict
370Phosphothreonine(MAPK)HMM predict
373O-linkedHMM predict
374O-linkedHMM predict
376Phosphoserine(CDC2)HMM predict
376O-linkedHMM predict
377O-linkedHMM predict
388Phosphoserine(ATM)HMM predict
388Phosphoserine(IKK)HMM predict
438Phosphoserine(ATM)HMM predict
457N-linkedHMM predict
459O-linkedHMM predict
459Phosphoserine(CDK)HMM predict
461O-linkedHMM predict
461Phosphothreonine(PKC)HMM predict
514Phosphoserine(CAMK2)HMM predict
538Phosphotyrosine(Syk)HMM predict
593Phosphoserine(CDK)HMM predict
593Phosphoserine(CDC2)HMM predict
671Phosphoserine(PKG)HMM predict
684Phosphoserine(IKK)HMM predict
684PhosphoserineHMM predict
684Phosphoserine(CAMK2)HMM predict
684Phosphoserine(PKB)HMM predict
699Phosphoserine(ATM)HMM predict
702O-linkedHMM predict
933O-linkedHMM predict
934N-linkedHMM predict
935O-linkedHMM predict
940Phosphoserine(IKK)HMM predict
991N-linkedHMM predict
993O-linkedHMM predict
996O-linkedHMM predict
998Phosphothreonine(PKC)HMM predict
1031N-linkedHMM predict
1032N-linkedHMM predict
1036N-linkedHMM predict
1039O-linkedHMM predict
1067Phosphoserine(IKK)HMM predict
1090N-linkedHMM predict
1093N-linkedHMM predict
1095N-linkedHMM predict
1098N-linkedHMM predict
1173Phosphotyrosine(INSR)HMM predict
1235N-linkedHMM predict
1282N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_015575
  • Location:chr2 233270284-233431561
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Pol2 GM12878GSE19551 233269862 233270573 711 67
USF1 HepG2E 233267364 233267818 454 2694
USF1 HepG2E 233268530 233268771 241 1634
USF1 HepG2E 233269418 233270345 927 403
USF2 HepG2E 233269418 233270103 685 524
hScc1 BcellGSE12603 233269870 233270652 782 24
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 233426085 233426314 229 0
CTCF CD4SISSRdata 233426085 233426314 229 0
CTCF G2GSE9613 233270042 233270622 580 0
FOXA1 MCF7GSE15244 233317944 233318159 215 0
Fos K562GSE19551 233426977 233427416 439 0
FoxA1 MCF7MACSdata 233317909 233318200 291 0
H3K4me3 colorectalcancer 233270900 233271747 847 0
H3ac HepG2E 233270652 233272840 2188 0
NFkBII GM12878GSE19485 233354137 233355712 1575 0
NFkBII GM12892GSE19485 233354293 233355582 1289 0
Nanog hESGSE18292 233426136 233426343 207 0
PHF8 293TGSE20725 233269607 233270977 1370 0
PHF8 HeLaGSE20725 233270146 233271105 959 0
Stat6 IL-4-hr1GSE17850 233330222 233330772 550 0
TAF HelaGSE8489 233386499 233386713 214 0
TAF k562GSE8489 233271199 233272348 1149 0
TAF k562GSE8489 233288846 233289282 436 0
TAF k562GSE8489 233291653 233291925 272 0
USF1 HepG2E 233270652 233272840 2188 0
USF2 HepG2E 233429672 233430439 767 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
15803 mRNA TNRC15 chr2 233387560 233548823 33 mRNA KCNJ13 chr2 233456678 233466780Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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