Annotation Detail for TCTN3
Basic Information Top
| Gene Symbol: | TCTN3 ( C10orf61,DKFZp564D116,TECT3 ) |
|---|---|
| Gene Full Name: | tectonic family member 3 |
| Band: | 10q24.1 |
| Quick Links | Entrez ID:26123; OMIM: NA; Uniprot ID:TECT3_HUMAN; ENSEMBL ID: ENSG00000119977; HGNC ID: 24519 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 78 | N-linked (GlcNAc...) (Potential). | |
| 179 | N-linked (GlcNAc...) (Potential). | |
| 347 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 78 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 179 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 347 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 25 | O-linked | HMM predict |
| 27 | Phosphoserine(CDC2) | HMM predict |
| 27 | Phosphoserine(CDK) | HMM predict |
| 27 | O-linked | HMM predict |
| 29 | Phosphoserine(ATM) | HMM predict |
| 29 | O-linked | HMM predict |
| 51 | O-linked | HMM predict |
| 69 | O-linked | HMM predict |
| 72 | Phosphothreonine(MAPK) | HMM predict |
| 72 | Phosphothreonine(CDK) | HMM predict |
| 74 | O-linked | HMM predict |
| 78 | N-linked | HMM predict |
| 144 | Phosphoserine(CDC2) | HMM predict |
| 179 | N-linked | HMM predict |
| 182 | N-linked | HMM predict |
| 203 | Phosphoserine(ATM) | HMM predict |
| 279 | N-linked | HMM predict |
| 288 | Phosphoserine(IKK) | HMM predict |
| 331 | N-linked | HMM predict |
| 347 | N-linked | HMM predict |
| 371 | O-linked | HMM predict |
| 374 | Phosphoserine(IKK) | HMM predict |
| 376 | Phosphothreonine(PKC) | HMM predict |
| 377 | Phosphoserine(MAPK) | HMM predict |
| 385 | Phosphotyrosine(INSR) | HMM predict |
| 407 | Phosphoserine(ATM) | HMM predict |
| 487 | N-linked | HMM predict |
| 532 | Phosphoserine(ATM) | HMM predict |
- RefSeq ID: NM_015631
- Location:chr10 97413163-97443889
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| hScc1 | Bcell | GSE12603 | 97443718 | 97444107 | 389 | 23 |
| hScc1 | CdLS | GSE12603 | 97443524 | 97444475 | 951 | 110 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 97443683 | 97444086 | 403 | 0 |
| CTCF | CD4 | SISSRdata | 97443683 | 97444086 | 403 | 0 |
| Fos | K562 | GSE19551 | 97443542 | 97444064 | 522 | 0 |
| H3K4me3 | colorectal | cancer | 97442644 | 97443524 | 880 | 0 |
| H3ac | HepG2 | E | 97442644 | 97443639 | 995 | 0 |
| Myc | K562 | GSE19551 | 97443367 | 97444095 | 728 | 0 |
| Oct1 | Hela | GSE14283 | 97434376 | 97434409 | 33 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 97443332 | 97444321 | 989 | 0 |
| PHF8 | 293T | GSE20725 | 97443133 | 97443848 | 715 | 0 |
| PHF8 | HeLa | GSE20725 | 97442938 | 97444063 | 1125 | 0 |
| TFAP2C | MCF7 | GSE21234 | 97413341 | 97413626 | 285 | 0 |
| p130 | Senescent | GSE19898 | 97443140 | 97444089 | 949 | 0 |
| p130 | shRbQuiescent | GSE19898 | 97443271 | 97444003 | 732 | 0 |
| p130 | shRbSenescent | GSE19898 | 97443385 | 97444047 | 662 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3507 | EST | chr10 | 97412805 | 97413452 | 289 | mRNA | C10orf61 | chr10 | 97413163 | 97443890 | Sense/Antisense (SA) pairs | |