Annotation Detail for SERBP1
Basic Information Top
| Gene Symbol: | SERBP1 ( CHD3IP,DKFZp564M2423,FLJ90489,HABP4L,PAI-RBP1,PAIRBP1 ) |
|---|---|
| Gene Full Name: | SERPINE1 mRNA binding protein 1 |
| Band: | 1p31.3 |
| Quick Links | Entrez ID:26135; OMIM: 607378; Uniprot ID:PAIRB_HUMAN; ENSEMBL ID: ENSG00000142864; HGNC ID: 17860 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 25 | Phosphoserine. | |
| 61 | Phosphothreonine. | |
| 68 | N6-acetyllysine. | |
| 85 | Phosphoserine. | |
| 122 | N6-acetyllysine. | |
| 140 | N6-acetyllysine. | |
| 197 | Phosphoserine. | |
| 203 | Phosphoserine. | |
| 211 | N6-acetyllysine. | |
| 221 | Phosphoserine. | |
| 232 | Phosphothreonine. | |
| 234 | Phosphoserine. | |
| 244 | Phosphotyrosine (By similarity). | |
| 252 | Phosphoserine. | |
| 255 | Phosphothreonine. | |
| 328 | Phosphoserine. | |
| 330 | Phosphoserine. | |
| 391 | Phosphoserine (By similarity). | |
| 392 | Phosphoserine. | |
| 394 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 25 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| 197 | Phosphoserine. | Swiss-Prot 53.0 |
| 197 | Phosphoserine | Phospho.ELM 6.0 |
| 234 | Phosphoserine. | Swiss-Prot 53.0 |
| 234 | Phosphoserine | Phospho.ELM 6.0 |
| 244 | Phosphotyrosine (By similarity). | Swiss-Prot 53.0 |
| 252 | Phosphoserine. | Swiss-Prot 53.0 |
| 330 | Phosphoserine. | Swiss-Prot 53.0 |
| 391 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 74 | Phosphoserine(PKG) | HMM predict |
| 74 | Phosphoserine(PKC) | HMM predict |
| 165 | Methylarginine | HMM predict |
| 197 | Phosphoserine | HMM predict |
| 226 | Phosphothreonine(PKC) | HMM predict |
| 234 | Phosphoserine(ATM) | HMM predict |
| 245 | N-linked | HMM predict |
| 253 | N-linked | HMM predict |
| 258 | Phosphothreonine(MAPK) | HMM predict |
| 330 | Phosphoserine(CK1) | HMM predict |
| 378 | Methylarginine | HMM predict |
- RefSeq ID: NM_001018067
- Location:chr1 67646082-67668710
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 67669183 | 67669420 | 237 | 591 |
| H3ac | HepG2 | E | 67668969 | 67669929 | 960 | 739 |
| TAF | k562 | GSE8489 | 67669059 | 67670256 | 1197 | 947 |
| TFAP2C | MCF7 | GSE21234 | 67668505 | 67669058 | 553 | 71 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 67667751 | 67668015 | 264 | 0 |
| E2F4 | G0 | GSE7516 | 67667131 | 67667891 | 760 | 0 |
| ETS1 | Jurkat | GSE17954 | 67667364 | 67669656 | 2292 | 0 |
| GABP | k562 | GSE8489 | 67666100 | 67667578 | 1478 | 0 |
| H3K4me3 | colorectal | cancer | 67666175 | 67668249 | 2074 | 0 |
| H3ac | HepG2 | E | 67665776 | 67668357 | 2581 | 0 |
| LIN9 | G0 | GSE7516 | 67667026 | 67668394 | 1368 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 67667637 | 67669704 | 2067 | 0 |
| Rb | Quiescent | GSE19898 | 67667464 | 67668281 | 817 | 0 |
| Rb | Senescent | GSE19898 | 67667725 | 67668242 | 517 | 0 |
| TAF | Hela | GSE8489 | 67666204 | 67668249 | 2045 | 0 |
| TAF | k562 | GSE8489 | 67661916 | 67664094 | 2178 | 0 |
| TAF | k562 | GSE8489 | 67664402 | 67668249 | 3847 | 0 |
| p130 | Quiescent | GSE19898 | 67667224 | 67667726 | 502 | 0 |
| p130 | Senescent | GSE19898 | 67667059 | 67668137 | 1078 | 0 |
| p130 | shRbQuiescent | GSE19898 | 67667104 | 67668084 | 980 | 0 |
| p130 | shRbSenescent | GSE19898 | 67667199 | 67668103 | 904 | 0 |
| p130 | G0 | GSE7516 | 67667026 | 67668394 | 1368 | 0 |
Validated miRNA targets