Annotation Detail for PHF19
Basic Information Top
| Gene Symbol: | PHF19 ( MGC131698,MGC149712,MGC149713,MGC23929,MTF2L1,PCL3 ) |
|---|---|
| Gene Full Name: | PHD finger protein 19 |
| Band: | 9q33.2 |
| Quick Links | Entrez ID:26147; OMIM: 609740; Uniprot ID:PHF19_HUMAN; ENSEMBL ID: ENSG00000119403; HGNC ID: 24566 |
| Relate to Another Database: | SFARIGene; denovo-db |
Post Translation Modification- RefSeq ID: NM_001009936
- Location:chr9 122671674-122679426
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FOXA1 | MCF7 | GSE15244 | 122679862 | 122680430 | 568 | 720 |
| H3K4me2 | HCT116 | GSE10453 | 122679827 | 122680430 | 603 | 702 |
| H3ac | HepG2 | E | 122679862 | 122680708 | 846 | 859 |
| NRSF | mAb | Jurkat | 122679272 | 122680451 | 1179 | 435 |
| Rb | Growing | GSE19898 | 122679379 | 122679513 | 134 | 20 |
| Rb | Senescent | GSE19898 | 122679364 | 122679603 | 239 | 57 |
| TAF | Hela | GSE8489 | 122679862 | 122680326 | 464 | 668 |
| TAF | k562 | GSE8489 | 122679565 | 122681033 | 1468 | 873 |
| hScc1 | Bcell | GSE12603 | 122680776 | 122681068 | 292 | 1496 |
| p130 | Quiescent | GSE19898 | 122679349 | 122679520 | 171 | 8 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3ac | HepG2 | E | 122677284 | 122678000 | 716 | 0 |
| Oct1 | Hela | GSE14283 | 122676349 | 122676406 | 57 | 0 |
| Rb | Growing | GSE19898 | 122678946 | 122679159 | 213 | 0 |
| Rb | Senescent | GSE19898 | 122678519 | 122678862 | 343 | 0 |
| TAF | k562 | GSE8489 | 122676455 | 122678000 | 1545 | 0 |
| hScc1 | Bcell | GSE12603 | 122678598 | 122679749 | 1151 | 0 |
| p130 | Quiescent | GSE19898 | 122678562 | 122678915 | 353 | 0 |
| p130 | Senescent | GSE19898 | 122678551 | 122678844 | 293 | 0 |
| p130 | shRbQuiescent | GSE19898 | 122678525 | 122679008 | 483 | 0 |
| p130 | shRbSenescent | GSE19898 | 122678545 | 122679025 | 480 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-1 | hsa-mir-1-2 | 18 | 15685193 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 15685193 |
| hsa-miR-124 | hsa-mir-124-1 | 8 | 15685193 |
| hsa-miR-124 | hsa-mir-124-2 | 8 | 15685193 |
| hsa-miR-124 | hsa-mir-124-3 | 20 | 15685193 |
| hsa-miR-373 | hsa-mir-373 | 19 | 15685193 |
| hsa-miR-373* | hsa-mir-373 | 19 | 15685193 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 298 | Unknown | MicroArray | miR-124 | PHF19 | n_a | 15685193 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000119403 | G1-to-S transition | n_a | n_a | "epithelium, lymphocyte, muscle cell" | "benign tumour, malignant tumour, carcinoma, leukaemia, sarcoma" |