Annotation Detail for RSL1D1
Basic Information Top
| Gene Symbol: | RSL1D1 ( CSIG,DKFZP564M182,MGC138433,MGC142259,PBK1 ) |
|---|---|
| Gene Full Name: | ribosomal L1 domain containing 1 |
| Band: | 16p13.13 |
| Quick Links | Entrez ID:26156; OMIM: NA; Uniprot ID:RL1D1_HUMAN; ENSEMBL ID: ENSG00000171490; HGNC ID: 24534 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 1 | N-acetylmethionine. | |
| 325 | Phosphoserine. | |
| 328 | Phosphothreonine. | |
| 340 | Phosphothreonine. | |
| 358 | Phosphothreonine. | |
| 361 | Phosphoserine. | |
| 375 | Phosphothreonine. | |
| 392 | Phosphoserine. | |
| 396 | Phosphoserine. | |
| 401 | Phosphothreonine. | |
| 415 | Phosphothreonine. | |
| 421 | Phosphoserine. | |
| 423 | Phosphothreonine. | |
| 427 | Phosphoserine. | |
| 443 | Phosphoserine. | |
| 445 | Phosphoserine. | |
| 465 | Phosphothreonine. | |
| 467 | Phosphoserine. | |
| 468 | N6-acetyllysine. | |
| 469 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 340 | Phosphothreonine. | Swiss-Prot 53.0 |
| 358 | Phosphothreonine | Phospho.ELM 6.0 |
| 358 | Phosphothreonine | Phospho.ELM 6.0 |
| 358 | Phosphothreonine. | Swiss-Prot 53.0 |
| 361 | Phosphoserine | Phospho.ELM 6.0 |
| 361 | Phosphoserine | Phospho.ELM 6.0 |
| 361 | Phosphoserine. | Swiss-Prot 53.0 |
| 392 | Phosphoserine. | Swiss-Prot 53.0 |
| 392 | Phosphoserine | Phospho.ELM 6.0 |
| 396 | Phosphoserine. | Swiss-Prot 53.0 |
| 401 | Phosphothreonine. | Swiss-Prot 53.0 |
| 423 | Phosphothreonine. | Swiss-Prot 53.0 |
| 427 | Phosphoserine | Phospho.ELM 6.0 |
| 427 | Phosphoserine. | Swiss-Prot 53.0 |
| 443 | Phosphoserine | Phospho.ELM 6.0 |
| 443 | Phosphoserine. | Swiss-Prot 53.0 |
| 465 | Phosphothreonine | Phospho.ELM 6.0 |
| 465 | Phosphothreonine | Phospho.ELM 6.0 |
| 465 | Phosphothreonine. | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 6 | Phosphoserine(IKK) | HMM predict |
| 11 | O-linked | HMM predict |
| 11 | O-linked | HMM predict |
| 17 | O-linked | HMM predict |
| 18 | O-linked | HMM predict |
| 18 | O-linked | HMM predict |
| 19 | O-linked | HMM predict |
| 20 | O-linked | HMM predict |
| 20 | O-linked | HMM predict |
| 21 | O-linked | HMM predict |
| 83 | Phosphothreonine(PKA) | HMM predict |
| 83 | Phosphothreonine(PKC) | HMM predict |
| 90 | Phosphoserine(CK1) | HMM predict |
| 90 | Phosphoserine(CK2) | HMM predict |
| 104 | N-linked | HMM predict |
| 106 | Phosphothreonine(CDC2) | HMM predict |
| 106 | Phosphothreonine(MAPK) | HMM predict |
| 114 | Phosphotyrosine(EGFR) | HMM predict |
| 139 | Phosphotyrosine(Syk) | HMM predict |
| 204 | N-linked | HMM predict |
| 317 | Phosphoserine(CK1) | HMM predict |
| 340 | Phosphothreonine(MAPK) | HMM predict |
| 359 | N-linked | HMM predict |
| 361 | Phosphoserine(CK2) | HMM predict |
| 392 | Phosphoserine | HMM predict |
| 392 | Phosphoserine(CDC2) | HMM predict |
| 396 | Phosphoserine(CDK) | HMM predict |
| 396 | Phosphoserine(CDC2) | HMM predict |
| 398 | N-linked | HMM predict |
| 401 | Phosphothreonine(CDC2) | HMM predict |
| 401 | Phosphothreonine(MAPK) | HMM predict |
| 401 | Phosphothreonine(CDK) | HMM predict |
| 415 | Phosphothreonine(MAPK) | HMM predict |
| 415 | Phosphothreonine(CDK) | HMM predict |
| 423 | Phosphothreonine(MAPK) | HMM predict |
| 427 | Phosphoserine(CDC2) | HMM predict |
| 445 | Phosphoserine(PKC) | HMM predict |
| 454 | Phosphothreonine | HMM predict |
| 454 | Phosphothreonine(CDK) | HMM predict |
| 454 | Phosphothreonine(PKC) | HMM predict |
| 454 | Phosphothreonine(CDC2) | HMM predict |
| 454 | Phosphothreonine(MAPK) | HMM predict |
| 474 | Phosphoserine(PKG) | HMM predict |
- RefSeq ID: NM_015659
- Location:chr16 11838711-11852895
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3ac | HepG2 | E | 11852458 | 11853447 | 989 | 57 |
| H3ac | HepG2 | E | 11855771 | 11856322 | 551 | 3151 |
| Oct1 | Hela | GSE14283 | 11857155 | 11857186 | 31 | 4275 |
| P300 | T0-glioblastoma | GSE21026 | 11852693 | 11853564 | 871 | 233 |
| PHF8 | HeLa | GSE20725 | 11852015 | 11853887 | 1872 | 56 |
| PHF8 | Hs68plusFBS | GSE20725 | 11852156 | 11853734 | 1578 | 50 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | Fulvestrant-MCF7 | GSE14664 | 11833641 | 11833675 | 34 | 5054 |
| Fos | K562 | GSE19551 | 11821163 | 11821592 | 429 | 17334 |
| FoxA1 | MCF7 | MACSdata | 11835641 | 11835914 | 273 | 2934 |
| Oct1 | H2O2-Hela | GSE14283 | 11833641 | 11833671 | 30 | 5056 |
| Oct1 | Hela | GSE14283 | 11833641 | 11833673 | 32 | 5055 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 11852458 | 11852715 | 257 | 0 |
| GABP | k562 | GSE8489 | 11851498 | 11852120 | 622 | 0 |
| H3K4me3 | colorectal | cancer | 11851498 | 11852120 | 622 | 0 |
| H3K4me3 | colorectal | cancer | 11852458 | 11852637 | 179 | 0 |
| H3ac | HepG2 | E | 11851498 | 11852120 | 622 | 0 |
| NFkBII | GM12878 | GSE19485 | 11852076 | 11853470 | 1394 | 0 |
| TAF | Hela | GSE8489 | 11851498 | 11852120 | 622 | 0 |
| TAF | Hela | GSE8489 | 11852458 | 11852964 | 506 | 0 |
| TAF | k562 | GSE8489 | 11851498 | 11852120 | 622 | 0 |
| TAF | k562 | GSE8489 | 11852458 | 11852750 | 292 | 0 |
| TAFII | hES | GSE17917 | 11852499 | 11853173 | 674 | 0 |
| hScc1 | Bcell | GSE12603 | 11852458 | 11852821 | 363 | 0 |
| p130 | Senescent | GSE19898 | 11852618 | 11853093 | 475 | 0 |
| p130 | shRbQuiescent | GSE19898 | 11852341 | 11852914 | 573 | 0 |
Validated miRNA targets