Annotation Detail for GATA1

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Basic Information Top

Gene Symbol:	GATA1 ( ERYF1,GATA-1,GF-1,GF1,NFE1,XLTT )
Gene Full Name:	GATA binding protein 1 (globin transcription factor 1)
Band:	Xp11.23
Quick Links	Entrez ID:2623; OMIM: 305371; Uniprot ID:GATA1_HUMAN; ENSEMBL ID: ENSG00000102145; HGNC ID: 4170
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Location(AA)	Modification
26	Phosphoserine (By similarity).
72	Phosphoserine (By similarity).
142	Phosphoserine.
178	Phosphoserine (By similarity).
187	Phosphoserine (By similarity).
310	Phosphoserine (By similarity).

Location(AA)	Modifications	Resource
310	Phosphoserine (PKB

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	48516649	48516786	137	13188
CTCF	G2	GSE9613	48518093	48518519	426	11600
CTCF	G2	GSE9613	48528298	48528766	468	1374
CTCF	G2	GSE9613	48529304	48530289	985	109
Gata1	K562	GSE18868	48526132	48526759	627	3460
Gata1	K562	GSE18868	48529018	48529514	496	640
Gata2	K562	GSE18868	48526012	48526669	657	3565
Gata2	K562	GSE18868	48528997	48529677	680	569
Oct1	H2O2-Hela	GSE14283	48528722	48528749	27	1170
Oct1	H2O2-Hela	GSE14283	48529624	48529658	34	265
Oct1	Hela	GSE14283	48518308	48518349	41	11577
Oct1	Hela	GSE14283	48528717	48528755	38	1170
hScc1	G2	GSE9613	48516649	48516975	326	13094
hScc1	G2	GSE9613	48518093	48518383	290	11668
hScc1	G2	GSE9613	48520553	48520849	296	9205
hScc1	G2	GSE9613	48528545	48528766	221	1250
hScc1	G2	GSE9613	48529559	48530185	626	34

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	48537881	48538048	167	306
Gata2	K562	GSE18868	48537642	48538787	1145	556

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
CTCF	G2	GSE9613	48531856	48532042	186
CTCF	G2	GSE9613	48536516	48536703	187
TAF	k562	GSE8489	48530133	48531236	1103
TAF	k562	GSE8489	48531856	48532150	294
TAF	k562	GSE8489	48532686	48532941	255

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-miR-124	hsa-mir-124-1	8	20448201
hsa-miR-124	hsa-mir-124-2	8	20448201
hsa-miR-124	hsa-mir-124-3	20	20448201
hsa-miR-125b	hsa-mir-125b-1	11	20194440
hsa-miR-125b	hsa-mir-125b-2	21	20194440
hsa-miR-125b-2*	hsa-mir-125b-2	21	20194440
hsa-miR-144	hsa-mir-144	17	18303114
hsa-miR-144*	hsa-mir-144	17	18303114
hsa-miR-181a	hsa-mir-181a-2	9	18809607
hsa-miR-181a	hsa-mir-181a-1	1	18809607
hsa-miR-181a*	hsa-mir-181a-1	1	18809607
hsa-miR-181a-2*	hsa-mir-181a-2	9	18809607
hsa-miR-181b	hsa-mir-181b-1	1	18809607
hsa-miR-181b	hsa-mir-181b-2	9	18809607
hsa-miR-181c	hsa-mir-181c	19	18809607
hsa-miR-181c*	hsa-mir-181c	19	18809607
hsa-miR-181d	hsa-mir-181d	19	18809607
hsa-miR-30e	hsa-mir-30e	1	19582161
hsa-miR-30e*	hsa-mir-30e	1	19582161
hsa-miR-451	hsa-mir-451	17	18303114

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018