Annotation Detail for GATA3

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Basic Information Top

Gene Symbol:	GATA3 ( HDR,MGC2346,MGC5199,MGC5445 )
Gene Full Name:	GATA binding protein 3
Band:	10p14
Quick Links	Entrez ID:2625; OMIM: 131320; Uniprot ID:GATA3_HUMAN; ENSEMBL ID: ENSG00000107485; HGNC ID: 4172
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Location(AA)	Modification
115	Phosphoserine.
162	Phosphoserine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Nanog	hES	GSE18292	8168403	8168835	432	11452
Oct1	H2O2-Hela	GSE14283	8176444	8176489	45	19299
Oct1	Hela	GSE14283	8176443	8176495	52	19302
RARA	MCF7	GSE15244	8166601	8167419	818	9843
RARG	MCF7	GSE15244	8162838	8163616	778	6060
RARG	MCF7	GSE15244	8166601	8167419	818	9843
TFAP2C	MCF7	GSE21234	8166614	8167551	937	9915

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
H3K27me3	colorectal	cancer	8140974	8141386	412
Oct1	Hela	GSE14283	8142950	8142977	27
P300	T0-glioblastoma	GSE21026	8141637	8142715	1078
P300	T30-glioblastoma	GSE21026	8141700	8142932	1232
RARA	MCF7	GSE15244	8142027	8142428	401
RARG	MCF7	GSE15244	8141990	8142428	438
RARG	MCF7	GSE15244	8145428	8146701	1273
RARG	MCF7	GSE15244	8150742	8151117	375
RARG	MCF7	GSE15244	8151401	8151950	549
RARG	MCF7	GSE15244	8155525	8155938	413
TFAP2C	MCF7	GSE21234	8143942	8144379	437
hScc1	Bcell	GSE12603	8138731	8139136	405
hScc1	CdLS	GSE12603	8138731	8139439	708

Validated miRNA targets

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-miR-122	hsa-mir-122	18	21059207
hsa-miR-122*	hsa-mir-122	18	21059207
hsa-miR-126	hsa-mir-126	9	19843690
hsa-miR-126*	hsa-mir-126	9	19843690
hsa-miR-144	hsa-mir-144	17	20656931
hsa-miR-144*	hsa-mir-144	17	20656931
hsa-miR-155	hsa-mir-155	21	20656931
hsa-miR-155*	hsa-mir-155	21	20656931
hsa-miR-200b	hsa-mir-200b	1	21059207
hsa-miR-200b*	hsa-mir-200b	1	21059207
hsa-miR-200c	hsa-mir-200c	12	21059207
hsa-miR-200c*	hsa-mir-200c	12	21059207
hsa-miR-205	hsa-mir-205	1	21059207
hsa-miR-210	hsa-mir-210	11	19141645
hsa-miR-302a	hsa-mir-302a	4	21059207
hsa-miR-302a*	hsa-mir-302a	4	21059207
hsa-miR-302b	hsa-mir-302b	4	21059207
hsa-miR-302b*	hsa-mir-302b	4	21059207
hsa-miR-302c	hsa-mir-302c	4	21059207
hsa-miR-302c*	hsa-mir-302c	4	21059207
hsa-miR-302d	hsa-mir-302d	4	21059207
hsa-miR-302d*	hsa-mir-302d	4	21059207
hsa-miR-302f	hsa-mir-302f	0	21059207
hsa-miR-373	hsa-mir-373	19	19141645
hsa-miR-373*	hsa-mir-373	19	19141645
hsa-miR-375	hsa-mir-375	2	21059207
hsa-miR-451	hsa-mir-451	17	20656931

Cis-Nats regulation

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018